Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0725 |
Symbol | |
ID | 4847607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 702466 |
End bp | 703698 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115408 |
Product | hypothetical protein |
Protein accession | YP_001046640 |
Protein GI | 126178675 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00111805 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCT GCGTTGTGGG GGGAGGTCTT TCCGGTCTGG TCTCGGCGCT CGAACTCGCC GGGACACACC AGGTGGATCT CTTCGAGCGA AGGCCGATTC CGGGCGGCTG CCTCGGTTCA TACCGGATCG GCGATTACTG GATCGAGGAG TATTACCACC ATTGTTTTGC CGGTGATACC GCCCTGCTCG ACCTCTTCGA TGCGCTGCAG GTGACAGATC GGCTGGTATG GCTTCACGGG TCCACCGGCT ACTACGTCGA CGGAACTCTC CACCCGCTCA CCACCCCGAC CGAGATCCTG CGCTACCCCC ATCTCACGCT CATGGAAAAG GCCCGTCTCG GCCTGCTGAC CCTGCGCTCC CGCCGGTTCG ACGTCTCGGC GCTCGACGAG ATCACCGCGA AGGATTTCAT CCTCGATAAC CTCGGTCCCG GGATATACTC CTCGTTCTTC GAACCGCTCT TAAAAAGCAA GTTCGGCGAC CGCCGTGATG AGGTTTCCGC CGCCTGGCTC ATATCCCGCA TCGCCATCCG ATCCGACCGG GGTGCCGGGG GCGAGCGTCT GGGCTACCTG AAAGGGGGTT TCCGGCACTT CGTCGCGCGG CTCGAGGAAG AGGCAGCGCA ACGGGGCGCC TCGATCCTGC CGGACACTCC CGTCGAAGAG ATCCGGCGGG AGGGCGGCGG CTGGGTCGTC AACGGGAGAT CGTATGACGC CGTCGTATCG ACGCTCCCCC CGCAGGCAAC CGCGGACCTT GCCGGTCTCG ATCTCGCCGA AATTCCCTAC CAGGGCGCCG CCTGCATGAC CCTCGCGCTC GACCGGGACG TGACCGACGG AATATACTGG CTGAACATGA AGGATGCCGC CCCTTACGGT GCGGTGGTCT CGCACACCAA CTTTGCCCCG CTCGAGTGGT ATGGGGAGCA TATCGTCTAC CTTGCATCCT ACTTCACCGG CCGGCTCCCG GAAGGATTCG AGCAGTCGAT GCTTGCCGAC TTCTGCCGGC GATTCTCCGT CAGTGAACGC GAAGTCCACT GGCACCGGCT CGCGGTCGAC CCGTATGCCG GCCCGGTCTA CACGACGGGG CTCCGTAACC GGCTGCCCGA CTACGAGGAG CACGGACTCT TCCTCGCCGG GATGTTCAGC CCTCCGAATT ACCCGGAGCG GAGCATGAAC GGTTCGGTCG TCGCCGGGCA GGAAGCGGCG AAGAGGGTTC TCGCGAGGTA TCCGGATGCG TGA
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Protein sequence | MKICVVGGGL SGLVSALELA GTHQVDLFER RPIPGGCLGS YRIGDYWIEE YYHHCFAGDT ALLDLFDALQ VTDRLVWLHG STGYYVDGTL HPLTTPTEIL RYPHLTLMEK ARLGLLTLRS RRFDVSALDE ITAKDFILDN LGPGIYSSFF EPLLKSKFGD RRDEVSAAWL ISRIAIRSDR GAGGERLGYL KGGFRHFVAR LEEEAAQRGA SILPDTPVEE IRREGGGWVV NGRSYDAVVS TLPPQATADL AGLDLAEIPY QGAACMTLAL DRDVTDGIYW LNMKDAAPYG AVVSHTNFAP LEWYGEHIVY LASYFTGRLP EGFEQSMLAD FCRRFSVSER EVHWHRLAVD PYAGPVYTTG LRNRLPDYEE HGLFLAGMFS PPNYPERSMN GSVVAGQEAA KRVLARYPDA
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