| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0718 |
|---|
| Symbol | ndk |
|---|
| ID | 4845900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 697380 |
|---|
| End bp | 697829 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640115401 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_001046633 |
|---|
| Protein GI | 126178668 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0214366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA CCTTCGTGAT GGTCAAGCCC GACGGCGTCC AGCGCGGACT TGTCGGAGAG
ATCGTCTCCC GGTTCGAGGC GAAGGGCCTC AAACTCGTCG GGGCGAAGCT CGAACTCCTC
CCCGAGGGTC GGGTCGTCGA GCAGTACCGC GAACACCTGG AGAAGCCCTT CTTCCCTGGC
CTTAAGGCTT ACATCATGAG CGGACCCTGC TTCCTGATGG CCTGGGAGGG CAAGGGTGTC
GTCGCGGTCG TCCGCAGGAT GGTCGGCGCC ACCAACCCCG CGGAGGCTGC ACCGGGGTCT
ATCCGCGGCA ACTTCGCGCT CGATATCGGG CGGAACGTGA TCCACGCGTC CGACTCCCCC
GAGAGCGCCG CCCGCGAACT CGGCATCCAC TTCGCGGCGG GCGAACTGGT CGATTACTCG
CGGATCGACG AGCCCGTTCT CTACGAGTGA
|
|---|
| Protein sequence | MDRTFVMVKP DGVQRGLVGE IVSRFEAKGL KLVGAKLELL PEGRVVEQYR EHLEKPFFPG
LKAYIMSGPC FLMAWEGKGV VAVVRRMVGA TNPAEAAPGS IRGNFALDIG RNVIHASDSP
ESAARELGIH FAAGELVDYS RIDEPVLYE
|
|---|
| |