Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0692 |
Symbol | |
ID | 4847066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 669983 |
End bp | 671854 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640115375 |
Product | hypothetical protein |
Protein accession | YP_001046607 |
Protein GI | 126178642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000426787 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTCT CCCTTGCTAC CATAACAGAT AACCTTGACA GGAATCTTGC AGTTGTGGGA GCAATTGCTT CGTTGTTCTT GATCTCCTAC ACAGCAATAA GCATCAGTCG GGTCGTATAT GTGTTACCCG GGGTTTTAAC GCTCCTTGCC TGCGTGACGT GGCTCGTTAT GAGAAAGAGG GTCTCGTTAC CGTTCCAGAT TGGAGAATCC AGATCAAAGG TGCATTTATT TCTTCTTCTC TATGTCATAT TTCTGATTGG AAGTATTCTC TCCGTCGGGT TCAGGCCCGA ACTCTATGAA AGACCGCTGC TTTTCTTTAT ATCGACATCA TTAATGGCCG GAGCAATTGC CTGCCAGATT CTGTTCTCAA ATGAACGGCA GAAGTGGCTC ATTATACCCC AGATTATCGC TCTCGGTGCG ATTATTGTAT GGTCTCAGTT ACTGCTATTC CCGAATGTGG TGGGAGCGGA CCCCTGGGCC CATCAGATGG TTACTACCTG GATTTTAGAG TCGCAAGCGA TTCCCGGTGG GAGGAATTAC AGCTATTTGC CGATATTCCA TCTTATGGTC GCAATGACCT CGCTGGTTAC CGACCTGGGT TATAAGCTTG CTGCGATGCT ATCGGTGAGT TTAGTTCAGA TCATCTGTAA TGTACTATTT TTGTACTTGC TTGCAGGTTT AATCTTTAAA AACCATAAAG TCGGCTTGTT TGCCTCTTTG ATGGTTGTGA TAGCAAATCA CCATATTTTC ATGAGTCTCG GTTCGATTCC GACCTCGTTT GCCGCCGTAT TCATCCCAAT CGTGTTTTAT GTGGCTTTGA AAGATCTTTC AGATCTATCG ATCTCCAAAA ATCTAATTAT AATTATTCTA TTTCTTACCA CTATTTTTAC ACACACGCTG GTGTCTGCAT GTTTGGCAAT ACTCCTGCTC GCATCATGGC TGTCGACGGT TGCTTTTAAT GCAATTCACT CGAGGGAACA TGCCACTATA CCTGTGCTGC TCCCTGTCCT CTTTACGCTC GCAATGTATT CGTGGTGGGT TTACGCTAGC GGTCACACGA AAATATTGGC GCAATTGATT GAATTGGGAT TCAGCAGGGA TTTTTTCGTC GCGAAAGGAG TGCCTGGGGC CACATCGACA TATTTGTCGG CGATCCCGGT GGGTGAGCAG GTCTTCAATC AGTTTGGGAT GTTTTTGTTT TTTGCCCTCT CTTTTATCGG CGTATTTTAC TTATTGTCTC GAAAAGACAA CAAAAGTTTT ATTATAGCAG TTATTGGGAT TATCCCTCTC GCGATCGGAT TTTTATCATT ACTATTTGGA TTTGGAGTGA TTGAACACCG ATGGTGGTAT TTTGCGCAAA TATTACTGAG TGTTCCACTT GGAGCAGCAA TTGTACTGCT CCTTAAGGCA TCGATGATAA CCAGTGAAAA AATAATTGCA CTTGGTTCGC TCATTTCCAT CTCTACGTTT GCGTTCCTAC TGATTATGAG TCCCAATGCT AACGTGGACA ATCATATGTT TTCGCCAAAT ACTGCGGTTA GATCTTCGCT TACCGAATCT GAATTGCACT CGATAAATTC TATCGCTGAG ATGTACACCA GAGAGATCGG GACAGAAAAG TATATCACAA ATGTTATATC GTTTCTACCC CTCGATATCG ACCTTACCCA GATAGATGAA AGCATATTCA CTGGAGATTA TTCTGAATTG GAGCAAAGGG ACGTATTAAT TCGAGAGGAT ATAAAAGAAA ATAGTTTTAA GTTGTTTCAA GGCCCGTATC GACTGGATTA TGATCTCGGA CAGAGAATAG AAGGACAGGG GTATTCTAAA ACATATAATG CTAACTCGGT CACCATGTAT TCTAATATAT GA
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Protein sequence | MRLSLATITD NLDRNLAVVG AIASLFLISY TAISISRVVY VLPGVLTLLA CVTWLVMRKR VSLPFQIGES RSKVHLFLLL YVIFLIGSIL SVGFRPELYE RPLLFFISTS LMAGAIACQI LFSNERQKWL IIPQIIALGA IIVWSQLLLF PNVVGADPWA HQMVTTWILE SQAIPGGRNY SYLPIFHLMV AMTSLVTDLG YKLAAMLSVS LVQIICNVLF LYLLAGLIFK NHKVGLFASL MVVIANHHIF MSLGSIPTSF AAVFIPIVFY VALKDLSDLS ISKNLIIIIL FLTTIFTHTL VSACLAILLL ASWLSTVAFN AIHSREHATI PVLLPVLFTL AMYSWWVYAS GHTKILAQLI ELGFSRDFFV AKGVPGATST YLSAIPVGEQ VFNQFGMFLF FALSFIGVFY LLSRKDNKSF IIAVIGIIPL AIGFLSLLFG FGVIEHRWWY FAQILLSVPL GAAIVLLLKA SMITSEKIIA LGSLISISTF AFLLIMSPNA NVDNHMFSPN TAVRSSLTES ELHSINSIAE MYTREIGTEK YITNVISFLP LDIDLTQIDE SIFTGDYSEL EQRDVLIRED IKENSFKLFQ GPYRLDYDLG QRIEGQGYSK TYNANSVTMY SNI
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