| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0652 |
|---|
| Symbol | |
|---|
| ID | 4847229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 625386 |
|---|
| End bp | 625832 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115334 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046567 |
|---|
| Protein GI | 126178602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.002002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC AGGGATATGT TCTCCTCCTC GCACTGCTCG CGCCGATCTC TCTCGTGCCG
GGTTCGGCCG CGGGCGGGGA GATCCCCATC AATTACTCGT TCAACGAGTC GCACGCGGAG
ATATACCCGC AGATGCTTGA GCGGAACGCC TCCGTAGGGG AATACTATGA GAGGATCTGC
CCCGAATTCC TGGAGAGCAT GCCCCCGGAG ACGAGGGCGC ATCTCTACAA CACGACGATG
CCCCGGCACC GGCCTCCCGG TGCCGACGGA GAATTTGTGC CGCCCCTGAT AACGGGCAAA
GTCGCCATCG CCACCGCATC CCCCGTGATC TCGGTGTGCG GAGTGCCCGT TGTCCTCGTC
GCCATCGGTC TCGCCGGTAT CGGCATCCTT GCCCTAATCA CGGTGGCCTT GCTCGTCCGG
GAGCGTATCC GCAACGGGAA GGAGTGA
|
|---|
| Protein sequence | MKKQGYVLLL ALLAPISLVP GSAAGGEIPI NYSFNESHAE IYPQMLERNA SVGEYYERIC
PEFLESMPPE TRAHLYNTTM PRHRPPGADG EFVPPLITGK VAIATASPVI SVCGVPVVLV
AIGLAGIGIL ALITVALLVR ERIRNGKE
|
|---|
| |