Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0651 |
Symbol | |
ID | 4846180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 624589 |
End bp | 625380 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640115333 |
Product | ABC transporter-related protein |
Protein accession | YP_001046566 |
Protein GI | 126178601 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000600585 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCGT TCTCTGCCGT CCGGCAACTC CGCGACTTCA CTCTCGACGT CACGCTCTCG GTCGGGTGCG GGGAGACCCT CGTCCTCGTC GGCGAGAACG GGGCGGGCAA GTCCACGGTG CTGAACCTGA TCTCCGGCAT CCTCACCCCT GACCGTGGGG AGATCGTCCT CGGGGAGAGG AGGCTCTACT CAGGCGAGGA GGGGATCGAC GTCCCCGCCG AGAGCCGGAA GGTCGGCCAC CTCTTCCAGT CTTACGCCCT CTTCCCGCAT ATGACCGTCG CCGAGAACGT GGCGTTCGGC CTCCGCTGCC GGAAGGTCTC GCGGCCGGAG ATCGCGTTCT CCGTGACGAA CCAGCTTCGC GCGATGAACC TCGCCGATCT TGCGGACGTC AACGTCGGCA GGCTCTCGGG CGGGCAGCGG CAGCGGGTGG CCCTCGCCCG GGCGCTGGTG CTCGACCCGG ACCTCCTCCT CCTCGACGAA CCGCTCGCCG CCGTCGATAT GCGGGCGCAA GCTGCGATGC GAATGGAACT CCGCGACCGG ATACGGAGCG CCGGCATCCC CTGCATCGTC GTCACCCACA ACCTCCGCGA CGCCCTCGAA CTCGCCGACC GCCTCTGCCT CCTCGAAGAG GGGCAGGTGG TCGCCGAGGG TGCGCCGGAG GAGGTGCTCG GCATGCAGGA TAACGGGTTC ATCGCGAGTT TTGCCGGGTC GGAACCCCAC AACGGCTTTA TGCCCCGGGC GTCTATCACT GGTCATAGCC GGAGGCTGCC GGACTCCCGG CCCCTCGGAT GA
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Protein sequence | MLSFSAVRQL RDFTLDVTLS VGCGETLVLV GENGAGKSTV LNLISGILTP DRGEIVLGER RLYSGEEGID VPAESRKVGH LFQSYALFPH MTVAENVAFG LRCRKVSRPE IAFSVTNQLR AMNLADLADV NVGRLSGGQR QRVALARALV LDPDLLLLDE PLAAVDMRAQ AAMRMELRDR IRSAGIPCIV VTHNLRDALE LADRLCLLEE GQVVAEGAPE EVLGMQDNGF IASFAGSEPH NGFMPRASIT GHSRRLPDSR PLG
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