Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0645 |
Symbol | |
ID | 4848309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 619115 |
End bp | 619921 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640115327 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001046560 |
Protein GI | 126178595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00927658 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCTGA CCAAGCGGAT CATCCCCTGC CTTGACCTCA AGGACGGGCG GGTGGTCAAG GGCACGCACT TCGTCGGCCT GCGCGACGCG GGCGATCCCG TCGAACTCGC CCAGCGCTAC AACGAGCAGG GCGCGGACGA GGTGGTCTTC CTCGACATCA CCGCCACCAG GGAAGACCGG GGCACCATCA TCGACGTCGT GCAGCGGGCG GCCGACCAGC TCTTTCTCCC GCTCACCGTC GGCGGCGGCA TCCGGACGAT CGAGGATATG AAACAGATCC TCCGGGCGGG CGCGGACAAG GTGAGCATCA ACTCGAGCGC CGTCGCCGAC CCGAACCTGA TCTCGCAGGG CGCCGAGCGG TTCGGCACCC AGTGCATCGT CGTCGCCGTC GATGTCCGGC GCAACTACGA GACGGCACCG GGAAAAACGC CGATAACACT CGCCGACGGC CAGGAGTGCT GGTACGAGGT CGTGACCCAC GGCGGGAGCC GGGGCACGGG GCTTGACGCC GTCGCCTGGG CGACAGAGGC GGAGGAGCGC GGGGCGGGCG AGATCCTGCT CACCAGCATG GAGGCCGACG GGACGAAAGA GGGGTTCGAC ATCCCGATCA CGAGAGCGGT TTCGGAGACG GTCGGCATCC CGGTGGTCGC GAGCGGCGGC GTGGGGACGC TCGACCACTT CTACGACGGA TTCACGGAAG GAAAGGCCGA CGCCTGCCTC GCGGCAAGCG TCTTCCACTA CGGCGAGTTC ACCGTCCGCC AGGTCAAGGA GTATCTGGCA GGGCGGGGTA TCCCGGTACG GCTGTAA
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Protein sequence | MVLTKRIIPC LDLKDGRVVK GTHFVGLRDA GDPVELAQRY NEQGADEVVF LDITATREDR GTIIDVVQRA ADQLFLPLTV GGGIRTIEDM KQILRAGADK VSINSSAVAD PNLISQGAER FGTQCIVVAV DVRRNYETAP GKTPITLADG QECWYEVVTH GGSRGTGLDA VAWATEAEER GAGEILLTSM EADGTKEGFD IPITRAVSET VGIPVVASGG VGTLDHFYDG FTEGKADACL AASVFHYGEF TVRQVKEYLA GRGIPVRL
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