| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0639 |
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| Symbol | |
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| ID | 4846307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 610141 |
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| End bp | 612450 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640115321 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001046554 |
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| Protein GI | 126178589 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.292646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAA TTAACGTGCT GATTGTTGTC TGTACCGTCA TTGCCGTCGG GCTGCTGGCA
TCGCCTGCCA TGGCCGGGGA GAGGGCCCCG GGAGATACAG TTTCGATCTG TATCGATGGA
GGATCGCAGG AGCACCCCGA CATTGACGGA AATATGGTCG TCTGGGAGGA CGGCAGGAAC
GGAAAGTCGA TCTACTATTC GAGCGGCCCC GGCAGCGCGG GGCGGAAGGT TGCGGGCGAG
GGGACGGGGC AGAGGTACCC GTCCGTCTCG GGGGATTACA TCGTCTGGGA GGAGAACCGG
AACATGAGCC CGGATATCTA CTTCTTCGAG ATATCGGGTG GCGTGACGAC GGCGCTCACC
GAAGACCCTG CCGACCAGCG GATGCCCGTC GTTCACGGAG AGCATGTGGT CTGGTACGAT
GCCCGGGGCG GGAGCACGGA CATCTGCCTC TATGAGATCG GAACCGGCAG CGAGACCTTC
CTCTCCTGCT CGCCGGTGAC CGAATGGAAG CCCGCGCTCT CGGAGAGGTA CGTCGTCTGG
GAGGAGAACA CCGGGAATGG AGATATCTGG CTGTACGATA TCTGGAACGG GGATAAGCAG
CCGATTACGC AGGATAACCG GCGGCAGACC TACCCGTCGA TATCGGGGAG CCGGATCGTC
TGGGAGGACT ACCGGAACGG GGCTCCCGAC ATCTACCTCT TCGATCTCGA CAACCCTGCC
GCCGGAGAGC AGAGGATCAC CGACGATCCC AGAGAGCAGG TCTCCCCGGC GATCGATGGT
GACCTCATCG CCTGGGAGGA CAGGCGGGAC GGAACCTGGA ACGTTTACAT CTGCGACCTC
GCCGCAGGGA AGGATAAGCA GATGCCGGTC GCTCCTTCCG CGACCGAACA GCTCTACCCC
GCCGTCAGCG GTGACCGGGT CGTCTGGCAG AACGGCCGTG ACAGCGGATC GGATATCTAC
GCCTTCACCT ACTTCAGCGG AGCGGTCCCG GTGGCGGAGT TCTCGGCAGA CCCGACCGAA
GGAGGGGCGG CGCTCAACGT CTGGTTCATC GACCAGTCAG CCGGCGATCC GGACGCCTGG
GAATGGGACT TCGGCGACGG GAACACCTCG ACCTCGCAGT ATTCGTGGCA CTTCTACGAG
ATCCCGGGGA ACTACACCGT CTCGCTCACG GTGCATAACG CGTTCGGGTC CGACACCGTC
ACGAAGACCG ATCTCATTCA CGTAGGTCCC CCGGAACCGC CGGTTATCAG CTTCCGGGGG
GAACCGTTGT CGGGGCCTGC GCCTCTTATG GTCTATTTTT ACGGTGATTT ACCAGATTAC
GCGACGGCCT GGCTCTGGGA CTTCGGTGAC GGCGAGACAT CGACACACCG GGACACGCGT
CACCGTTACG ATCGTCCCGG TGTTTACAAC GTCTCCCTGA CCTGTGACAA CGCGGGAGCC
AGCGCGACGC ACATGGAGTA CGGCTACATC ACCGTCTATT CCGCAACTCC GACCCCGACC
GTGACCCCGA CTGCAACGGT TAACGTGACG CCGACCGCGA CACAGACTGC AACCCCGACC
GCGACGCAGA AGTCCGCGAG CGGCGGCGGA GGGGGAGGAG GCGGTGGGGG TGGCGGCGGC
TCCGCCCCGG TCAACCCCGG CTGGAGCACG CAAAAGTCCA CCCCCACGCC TACCCCCACC
GTGACGGCGA AGCCCACTCC CCGTGAAGCC GACTCCGGCC GCCTGCACCT CGGGGAGACC
GGCCTCGTCG ATCAGGCCGC CAGGATCGGT TCGGCCGACG GTATTGCGAC CCTCACGATC
GCGGAGGGTG TCCGTGCTGT CGATGCCGCC GGCAACCCGC TTCGTGCGGT GACCCTTGCG
GCGCTTGGTG CGGCCGACGT GCCCGCGGTG CCCGGCGCGT ACGCGTTTGC CGGGTACGCC
TGGATCACCG GGCCGGAGGG GGCGATCTTC TCCCCGCCGG CGACCCTCTC GTTCAACTTC
ACAGAGGAGC AGTGGGACGC CGTCTACAAC GGCAGCGTGC AGGACGGGCT CGTGGTGCAG
CGATACGACC GGTCGGCCAA CACCTGGGAG GAGGTTCCCA CCACCGTCCT CCCGGAGACC
CGGAGCGTCA CAGCCGTTGT CTCTCACTTC AGCATCTACG CGCTCTTTGC CGCGGCACCC
GGAGACGGCG CGGCACAGGC GGTCGCCGCC GATACCGGCA CGAAACCCGT GGCCCGCGAG
ATCCCGTACG CGCATCTCAT CCCCGGCCTG CTTGCCCTCG TCATCGCAGG GGCCGGGGCC
TTCCTCTACT TCCGGAAGGA AGAGCCCTGA
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| Protein sequence | MAEINVLIVV CTVIAVGLLA SPAMAGERAP GDTVSICIDG GSQEHPDIDG NMVVWEDGRN
GKSIYYSSGP GSAGRKVAGE GTGQRYPSVS GDYIVWEENR NMSPDIYFFE ISGGVTTALT
EDPADQRMPV VHGEHVVWYD ARGGSTDICL YEIGTGSETF LSCSPVTEWK PALSERYVVW
EENTGNGDIW LYDIWNGDKQ PITQDNRRQT YPSISGSRIV WEDYRNGAPD IYLFDLDNPA
AGEQRITDDP REQVSPAIDG DLIAWEDRRD GTWNVYICDL AAGKDKQMPV APSATEQLYP
AVSGDRVVWQ NGRDSGSDIY AFTYFSGAVP VAEFSADPTE GGAALNVWFI DQSAGDPDAW
EWDFGDGNTS TSQYSWHFYE IPGNYTVSLT VHNAFGSDTV TKTDLIHVGP PEPPVISFRG
EPLSGPAPLM VYFYGDLPDY ATAWLWDFGD GETSTHRDTR HRYDRPGVYN VSLTCDNAGA
SATHMEYGYI TVYSATPTPT VTPTATVNVT PTATQTATPT ATQKSASGGG GGGGGGGGGG
SAPVNPGWST QKSTPTPTPT VTAKPTPREA DSGRLHLGET GLVDQAARIG SADGIATLTI
AEGVRAVDAA GNPLRAVTLA ALGAADVPAV PGAYAFAGYA WITGPEGAIF SPPATLSFNF
TEEQWDAVYN GSVQDGLVVQ RYDRSANTWE EVPTTVLPET RSVTAVVSHF SIYALFAAAP
GDGAAQAVAA DTGTKPVARE IPYAHLIPGL LALVIAGAGA FLYFRKEEP
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