| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0637 |
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| Symbol | |
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| ID | 4847042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 607984 |
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| End bp | 608952 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640115319 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001046552 |
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| Protein GI | 126178587 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.253022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAAGG TAGCGGTCGT TGAGGGCGAC GGCATCGGGC GCGAGGTCGT CCCGGTCGCC
CGCGACATCC TCGCGGCCGT GCGCCCGGAT ATCGAGTTCT TCGACGTCGA GGTGGGATAC
GGCCGGTGGG AGCGGACCGG GAGCGCCTGC GACGAGGAGA CGATCGCCGC TCTCCGGTCG
GCGGACGCAA TCCTCTTCGG GGCAATCACG ACCCCGCCCG ACCCCGGCTA CCGGAGCGTT
CTCATGCAGA TCCGCCGTGC TCTCGACCTC TACGCGAACG TCCGCCCGAT CCGGGGCGAG
GGGGTCGACG TCGTCATCGT GCGGGAGAAC ACCGAAGGGC TCTACTCCGG CATCGAGTGG
ACGGAGCCTG ATCGCGCCTG CACCGTCCGG GTCGTCTCCC GCCGGGGGAG CGAACGGATC
GCCCGCTACG CCTGCACTCT CGCGAAGTCC CGCCGCCACC TCACCGTCGG CAACAAGGCG
AACGTCTTAA AGTCGGACTG CCTCTTCGTC GAGGCCTGCA CCGCGGAGGC CGCCCGGGCG
GGGGTTCCCT GCACCTTCTG CTACATCGAC GCGCTCTGCC TCGATCTCCT GATGCACCCG
GACCGCTACG ACGTGATCGT GACGACCAAC ATCTTCGGCG ACATCCTCTC CGACGCCGCC
GCCTACCTTG TCGGGGGGCT CGGGCTGCTC CCGAGCGCCA ATATCGGGGA GGGGCACGCT
CTCTTCGAGC CCGTCCACGG CAGCGCTCCC GACATCGCGG ACAAAAACGT CGCAAACCCC
ATTGCGGCCA TCCGGAGCGG AGCGATGCTG CTCTCCCACC TCGGCGATCC CGCATCCGCG
GCGGCCGTGG AGGAGGCCGT CGACCGGGTG CTTCGTGCAG GCATCCGGAC ACCCGACCTC
GGCGGAGCCG CCGGCACCCG GGAGTTCGGG GCGGCGGTGC TCCGCGAGGT CGGGCGGGGG
AAGGCCTAA
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| Protein sequence | MVKVAVVEGD GIGREVVPVA RDILAAVRPD IEFFDVEVGY GRWERTGSAC DEETIAALRS
ADAILFGAIT TPPDPGYRSV LMQIRRALDL YANVRPIRGE GVDVVIVREN TEGLYSGIEW
TEPDRACTVR VVSRRGSERI ARYACTLAKS RRHLTVGNKA NVLKSDCLFV EACTAEAARA
GVPCTFCYID ALCLDLLMHP DRYDVIVTTN IFGDILSDAA AYLVGGLGLL PSANIGEGHA
LFEPVHGSAP DIADKNVANP IAAIRSGAML LSHLGDPASA AAVEEAVDRV LRAGIRTPDL
GGAAGTREFG AAVLREVGRG KA
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