Gene Memar_0635 details

Gene Information

• Locus tag: Memar_0635
• ID: 4847333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 606718
• End bp: 607188
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640115317
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_001046550
• Protein GI: 126178585
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.100869
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGGTG CCGGACCGGC AATCTGTCTC GGGAACGACA TCGACACCGA CCTCATCATC 
GCCGGCCGCT ACCTCCGGAC GAAAGACCGC TCGGTCTGGG CGGAGCACGC CTTCGAGGAC 
CTCGACCCGG CGCTCGCCCC CCGCCTTTCG GGATCGGTCA TCGTCGCCGG AAAGAACATG 
GGCTGCGGGT CGTCCCGCGA GCAGGCGGTG GTCGCCCTCC GCGAGGCGGG TGTCGTCGCG 
GTCGTCGCGG AGTCGTTCGC CCGCATCTTC TTTCGGAACG CCGTCAACGT CGGCCTGCCG 
GTGATCGAGG CCCCCGTCGC CTGCACCGAC GGCGCCCGCG TCGCCTTCGA CCTCGATGGC 
GGGTGGGTCG AGGTTGACGG GAAGCGTTAT CCCGCTCGCC CGCTCTCGGA GAAGATGGTC 
GCCATCCTCC GGTCCGGGGG GCTGGTTCCC TACTGGAGGT CGTGGCGATG A 

 

Protein sequence

MQGAGPAICL GNDIDTDLII AGRYLRTKDR SVWAEHAFED LDPALAPRLS GSVIVAGKNM 
GCGSSREQAV VALREAGVVA VVAESFARIF FRNAVNVGLP VIEAPVACTD GARVAFDLDG 
GWVEVDGKRY PARPLSEKMV AILRSGGLVP YWRSWR