| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0633 |
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| Symbol | aksA |
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| ID | 4846278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 604380 |
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| End bp | 605510 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640115315 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001046548 |
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| Protein GI | 126178583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0200993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT GGAATATCGA GATCTGTGAT GTAACGCTGC GAGACGGGGA GCAGACTCCC
GGCGTCTCGT TTACCCGCGA TGAGAAGATG ACGATCGCGG CATTGCTCGA CGAGATCGGC
GTGGAGGTGA TCGAGGCCGG GTTTCCCGTG GTCTCCGCGG CGGAGAAGGA GTGCGTCGCG
GCCATTGCCC GGGCTGGTCT ATCTGCCCGG GTCTGCTGTC TCGCACGGGC GCTCAAGCCC
GATATCGAGG CGGCGCTCGA CTGCGACGTG GATATGGTCA GCATATTCTT CGCGACCTCC
GATCTTCACA TCCGGCACAA GTACCGAAAA TCCCGCGAAG AGGTGCTCGA GGACGCTCTT
GACATGGTGG AGTTCGCCGC CGATCACGGC GTGCAGGTGC GGTTCGCCGC CGAAGACGCT
TCGCGAACCG ACCCGGCGTT TCTCATCGAG ATGTATACCC GTGGCGTCGA GCGCGGCGCG
AACCTCGTCA GTTTCGCCGA TACCGTCGGC TGCCTCACGC CGCTCGAGAT TCACGCGGTC
GTCACCCGTC TCCTCGGCGC GGCCCCCCTT CCGCTCTGTA TCCACTGCCA CAACGACCTC
GGGCTTGCGA CGGCAAACAC CGTCACGGCC GCGGCCGCCG GGGCGTTCCA GCTCCACACC
ACCGTCAACG GCATCGGGGA GCGTGCGGGC AACGCGGCAC TCGAACAGGT GCTCGCCGTC
CTGCGGCTGA AGGGCGGCGT CGACCGCTAC GATCTTACCC GCCTGCAGGA GATCTCGCGC
CTGGTCGCCC GGGCTTCGGG CGTTGCCCCG GAACGCACCC GGCCGATCGT CGGTGAGAAC
GCCTTTGCCC ACGAGAGCGG GATCCATATC GCCGCGATCC TCTGCGATCC GACGACCTAC
GAGTACGTCC CGCCGGAACT GGTGGGCGGC GAACGACGGT TCGTCCTCGG AAAGCATACG
GGGCGGCGGG CGCTCGAGCA CGTCGCGAAA GCCTACGGGT TCGACCTCTC CGAAGAGGAG
GCGCGGTGGG TGCTCGAGCA GGTGAAACAG AAGAGCGAGG GCAAGTGCAG CGTCACCCGC
GAGGTGCTCT GCAGTCTTCT GCGAGCGGCA AAGGAGGGGA TCGTCCAGTG A
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| Protein sequence | MKPWNIEICD VTLRDGEQTP GVSFTRDEKM TIAALLDEIG VEVIEAGFPV VSAAEKECVA
AIARAGLSAR VCCLARALKP DIEAALDCDV DMVSIFFATS DLHIRHKYRK SREEVLEDAL
DMVEFAADHG VQVRFAAEDA SRTDPAFLIE MYTRGVERGA NLVSFADTVG CLTPLEIHAV
VTRLLGAAPL PLCIHCHNDL GLATANTVTA AAAGAFQLHT TVNGIGERAG NAALEQVLAV
LRLKGGVDRY DLTRLQEISR LVARASGVAP ERTRPIVGEN AFAHESGIHI AAILCDPTTY
EYVPPELVGG ERRFVLGKHT GRRALEHVAK AYGFDLSEEE ARWVLEQVKQ KSEGKCSVTR
EVLCSLLRAA KEGIVQ
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