Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0630 |
Symbol | |
ID | 4846252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 601306 |
End bp | 602199 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640115312 |
Product | hypothetical protein |
Protein accession | YP_001046545 |
Protein GI | 126178580 |
COG category | [R] General function prediction only |
COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00298214 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAC TCTCTGATCC GTATACGATA CGGTATCCTC AGATCGTGGC GGTGGCCGAC GAGAGCGGCG GGCTTGTGGA ACTCGTCGAG TTCTTCGACT GCACCGGCGG CGCGATGTGG GTGAAGCGGC ACTACGCGCA GAGCCCGCTC GTCCGCTCCG TCCGCACGGT TGGGTCGACC AACCGCTACC TCCTCTCGAC CGGGAGCGCC GACCTCGCGC TCGAGGGCTC GGTCTTTCCG GCGGGGATCG CCGCCGTCGC CGTCGAAGAG GGCGAGATTG CCGTCACCTA CCGGGGGCTC GGCGGCGGAG GCGTGGGGGC GTCGGTCTGC CGTGCCGGGG CCCGCGGTGT CGTCCGCTGC GTGAGCGACC CGGCCGGCGG CGGGCGACTC GCGGGTTCAA CCGTCTGGCT TCCCCGGCTT GAGCGGGTGA TCGTCGGGAT CGACGACACC GATACCCCCG AAGAGGGCGC CACCTGGACG CTCGCGCACA ACATCGCCCG GGCCGTCGAG GACGACCGTT CGCGCTACCT CTCCCACACC ATCGTTCAGC TCTATCCCGT TCCCTACCGG ACCAAGAACT GCGTCGCCAT CGCCTGCGAG TTCGCCACTT CCGATCCCGA GGGGCTGATC AGGAACTACC GCGATCTCCT CGAAGAGTAC ACCCTCTCGG ACGAGACCGG GATGGCGGTC TGGCGGGGGT TCGACCCCTC GCCGCTCGAA GAATTCGGCT GCCGCGTGAA GCGGGGCGAG GTCTCCGCAG ACGACCTTGC CGCCCTTGAC TCCGAACATC TCTCCGTCGT CATGGACGGC CGGGGCGTGA TCGGGGCGGT TGCGGCGATC CCGTTCTATA CACGATACGA GGAGGCGCTG GCGCTATGGA ATGGAAGCGG CTGA
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Protein sequence | MEKLSDPYTI RYPQIVAVAD ESGGLVELVE FFDCTGGAMW VKRHYAQSPL VRSVRTVGST NRYLLSTGSA DLALEGSVFP AGIAAVAVEE GEIAVTYRGL GGGGVGASVC RAGARGVVRC VSDPAGGGRL AGSTVWLPRL ERVIVGIDDT DTPEEGATWT LAHNIARAVE DDRSRYLSHT IVQLYPVPYR TKNCVAIACE FATSDPEGLI RNYRDLLEEY TLSDETGMAV WRGFDPSPLE EFGCRVKRGE VSADDLAALD SEHLSVVMDG RGVIGAVAAI PFYTRYEEAL ALWNGSG
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