| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0629 |
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| Symbol | |
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| ID | 4846250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 600366 |
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| End bp | 601322 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640115311 |
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| Product | hypothetical protein |
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| Protein accession | YP_001046544 |
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| Protein GI | 126178579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | [TIGR03280] putative methanogenesis marker protein 11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.110279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACGC TCACACCCGA TGAAGTCAGG GCCCGGTTCG GGCGGTTGTT CTCGATGAAG
TTCCTCGCCA TGGTCGACCA GAACGCCGGT CTCGCGGAGA TCCGCGAGCA CTGCCGGGCC
CGGGGGACCA TCGAGTGGGA CGCGGCGAAC CGGGTGCGGG CGAAGGGCGC GGTCCAGTCC
TGCCACGTCG AGGGCACGAC GATGACGATG ATCGCCCGAC TGGGCGTATC GCCGGCGAAC
TTCGGGGCTG CCGGCCAGGA GATCGGCGGG CAGGCGCTCG AGGGGGTCGA GGTCGTCGGG
GACGAAGTGG TGACGACCTG GGCGGGCATC GCGGGGGCGG GCGTCGGCGT CGCCGCCTGC
CTGCCGCAGG CGCCGGGCGT GATCCGGGCG GAGTATCCTA CCGAGGACGA TCTCAAGATC
GGCGGCGCCC GGGTCTGCCG GGTGCGGATC GTATCGCCGC TGTACGAGAA GGTGACGATC
GGGATCGACG ACACCGACAC CCGCGAGGAG GGTGCCACGT GGGTCCTCGC GCTCAAGTGC
GCCGAGGGCT GCACGATCCC GGGGGTCGAG TACCTGGACA TGCGCCTCGT GCAGCTCAAT
CCCGCGGTCC CGAAGAAGAC CACCAACTGC GTCGGTTCGG CCCTGAACTT CGCTGTCCGT
CCGGGAAAGG TGGACGAACT CCTCGAATAC GTCCGCGACT TCATTGAAGC GGAAGCGGTC
AGCAACGATA CCGGCATCGC CGTCTACCGC GGGATTGCGT TTGCAGAAGA GTCCCCGTAT
CTCAAGCGGG TCAAGACCGA GCTCCTGACG GTCGACGACG CGGAGGCGGA GGCGGCACGG
ATGGGTGTCC GGTTCATCGA CTCGACCGGG CGGAAGGGCC GAATCGGAGC GCTGGGTGCC
GTTCTCTGGG GGAACAAGGG CGTTGAGGCG GCTGGACTGT ATGGAGAAAC TCTCTGA
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| Protein sequence | MITLTPDEVR ARFGRLFSMK FLAMVDQNAG LAEIREHCRA RGTIEWDAAN RVRAKGAVQS
CHVEGTTMTM IARLGVSPAN FGAAGQEIGG QALEGVEVVG DEVVTTWAGI AGAGVGVAAC
LPQAPGVIRA EYPTEDDLKI GGARVCRVRI VSPLYEKVTI GIDDTDTREE GATWVLALKC
AEGCTIPGVE YLDMRLVQLN PAVPKKTTNC VGSALNFAVR PGKVDELLEY VRDFIEAEAV
SNDTGIAVYR GIAFAEESPY LKRVKTELLT VDDAEAEAAR MGVRFIDSTG RKGRIGALGA
VLWGNKGVEA AGLYGETL
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