Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0616 |
Symbol | |
ID | 4847112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 586084 |
End bp | 586560 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640115298 |
Product | methyl-coenzyme M reductase, protein D |
Protein accession | YP_001046531 |
Protein GI | 126178566 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4055] Methyl coenzyme M reductase, subunit D |
TIGRFAM ID | [TIGR03260] methyl-coenzyme M reductase operon protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000656018 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG CCATATACCC TCAGGTTCGA ATCGTTTCTG CGCGATTCCT CAGACCCGAT ACGGTGGAAC AACTTCTGAA CAGGCTTGTT CGGATCGGCG GGATTCTCCG GATGTCTCTT ACCGGACAGA ATCTTCCCGC CACCGTTCCC TACGGCCCGG CGCGGGGGAA ACCCAACCCC CACCCGGACC GCAAGGTCAT CCGTGTCGGA GACCAGGAAG TCCAGCTCGA GGTACAGGTA GGAGCTGTTA TCCTGGAACT CGAGGACGAG TCGTACATCC CGGCCATCGA GGAAGCGGTC GACGAAGTCT TTGCCAGCAA GGACTTCTCC TGCGCCGTCC AGAAAGGACG GTTCATGAAG ACCACCCCGA CGGTGTCCGA CTACGCGAAA TACGGACCTG ACGCCGACAG AGAAGTTCTC GGGCTCGTCG ATCCCAGGAA GAAAGGCGGT CCCGTCATCA TTCAGGGAAA CAAGTGA
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Protein sequence | MTEAIYPQVR IVSARFLRPD TVEQLLNRLV RIGGILRMSL TGQNLPATVP YGPARGKPNP HPDRKVIRVG DQEVQLEVQV GAVILELEDE SYIPAIEEAV DEVFASKDFS CAVQKGRFMK TTPTVSDYAK YGPDADREVL GLVDPRKKGG PVIIQGNK
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