Gene Memar_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0616 
Symbol 
ID4847112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp586084 
End bp586560 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640115298 
Productmethyl-coenzyme M reductase, protein D 
Protein accessionYP_001046531 
Protein GI126178566 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4055] Methyl coenzyme M reductase, subunit D 
TIGRFAM ID[TIGR03260] methyl-coenzyme M reductase operon protein D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000656018 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAG CCATATACCC TCAGGTTCGA ATCGTTTCTG CGCGATTCCT CAGACCCGAT 
ACGGTGGAAC AACTTCTGAA CAGGCTTGTT CGGATCGGCG GGATTCTCCG GATGTCTCTT
ACCGGACAGA ATCTTCCCGC CACCGTTCCC TACGGCCCGG CGCGGGGGAA ACCCAACCCC
CACCCGGACC GCAAGGTCAT CCGTGTCGGA GACCAGGAAG TCCAGCTCGA GGTACAGGTA
GGAGCTGTTA TCCTGGAACT CGAGGACGAG TCGTACATCC CGGCCATCGA GGAAGCGGTC
GACGAAGTCT TTGCCAGCAA GGACTTCTCC TGCGCCGTCC AGAAAGGACG GTTCATGAAG
ACCACCCCGA CGGTGTCCGA CTACGCGAAA TACGGACCTG ACGCCGACAG AGAAGTTCTC
GGGCTCGTCG ATCCCAGGAA GAAAGGCGGT CCCGTCATCA TTCAGGGAAA CAAGTGA
 
Protein sequence
MTEAIYPQVR IVSARFLRPD TVEQLLNRLV RIGGILRMSL TGQNLPATVP YGPARGKPNP 
HPDRKVIRVG DQEVQLEVQV GAVILELEDE SYIPAIEEAV DEVFASKDFS CAVQKGRFMK
TTPTVSDYAK YGPDADREVL GLVDPRKKGG PVIIQGNK