Gene Memar_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0601 
Symbol 
ID4847424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp572392 
End bp573456 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content64% 
IMG OID640115283 
Productperiplasmic binding protein 
Protein accessionYP_001046516 
Protein GI126178551 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.56983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCA CGCGCCTGAT ACACTCTCTT GCATCGCTTG TCGTGCTGCT CCTGCTCGCC 
GGGACGGCCG GTGCGACACC CGTGCCTCTC GAAGAACCGC TCGCAACGGC GGACGGCGGC
GAACGATCCG TGGCGGTGAC CGACGACTCC GGGAAGACCG TCCTCATCCG GGGAGCACCG
CAGAGAATCG TCTCGCTCGC GCCTTCCAAT ACCGAGATCC TGTATGCCCT CGGGCTTGAT
GACCGCATCG TCGCCGTCAC CGAACGCTGC GACTATCCGC CGGCAACAGC CGATAAGCCG
AAGGTAGGCG GTTTTAGCAC CGTCAACATC GAGAAAGTGA TCGCTATGGA GCCCGACCTG
ATCTTCGCCG CGCCCGCCAA CACCGACGAA GTCATCGACC GCCTGCGATC GCTCGGGATG
ACCGTCGTCA CCCTCGACCC GCAGACGATC GACGGTGTCC TGCACGACAT CGAACTTGCC
GGAAGGGCAA CCGGGCAGGA AGAAGAGGCT TCGAGACTCA TCGAAGAACT CCGGGCACGC
ATGGGAGTTG TTGCCGGAGA GGTGGCCGAG AGCCGGACCG AACAACCGTC CGTCGCCCAC
GTCATCTGGC ACGACCCGCT CTGGGTCTGC GGGCAGGGAA CGTTCCAGAA CGAGGTGATC
ACGATTGCCG GCGGAACCAA TGCGTTCGGC CCGGTCGACG GCTGGAGCAT CGTCAGCCTC
GAGGCGTTCA TCACCACGAA TCCCGACTAC ATCCTGGTCA GTTCGGGCAG CGGGATGGAC
CGGGACGGCT ACGACGCCAT CTACAACTAC ATCATCAACG AGCCCCGCCT GCAGAGGCTC
GATGCGGTCA GGAACGACCG CGTCTACGTC ATCGACGCCG ACGTCGTCAG CCGGGGGAGC
CCGCGGATCG TGGATGCGCT TGAAGAAGTG GCGGGCCACC TCCATCCGGA AACCACCGGG
ACGGGCACGC CGAAGCCGAC CGGGACGGTT CAATCACCGG GGTTCGGCGC GATCACGCTC
ATCTGCGCAT TATCCGCAGC CGTCCTGCTC CTGCAGAAGA GGTAG
 
Protein sequence
MQTTRLIHSL ASLVVLLLLA GTAGATPVPL EEPLATADGG ERSVAVTDDS GKTVLIRGAP 
QRIVSLAPSN TEILYALGLD DRIVAVTERC DYPPATADKP KVGGFSTVNI EKVIAMEPDL
IFAAPANTDE VIDRLRSLGM TVVTLDPQTI DGVLHDIELA GRATGQEEEA SRLIEELRAR
MGVVAGEVAE SRTEQPSVAH VIWHDPLWVC GQGTFQNEVI TIAGGTNAFG PVDGWSIVSL
EAFITTNPDY ILVSSGSGMD RDGYDAIYNY IINEPRLQRL DAVRNDRVYV IDADVVSRGS
PRIVDALEEV AGHLHPETTG TGTPKPTGTV QSPGFGAITL ICALSAAVLL LQKR