| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0594 |
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| Symbol | |
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| ID | 4846710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 566663 |
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| End bp | 567655 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115276 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001046509 |
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| Protein GI | 126178544 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTACT CGGTCGTGAC GGGGGATCTC TTCTCGGCCC ACGACGCGCC TGGCCACCCC
GAGTCGCAGG CCCGCCTCGA CGCCGCCCTC GCGGGGGTGC CGGCCGATGC CCGTCGCATC
GCCCCGGAGC GGGCGACGGT CGACGATCTG GCGCTGGTGC ACACAGAGCG GCATATCGAA
GGAGTCCGCT CGTTCTGCCG GGAGTGTCCG CCCGGCCGCG CCCGCTACCT CGATCCCGAT
ACCTACGTCA CGGCCGGTTC GTTCGATGCG GCGCTGTATG CGACCGGAGC CGCATGGCAG
GCGGTGGAAC GGGCTCTCGA CGGCGAGCAC TCTTTCGCTC TCGTCCGCCC GCCGGGGCAC
CATGCCGCAC CCGACCGGGC GATGGGGTTC TGTCTCTTCA ACAACGTTGC CGTGGCAACC
GCGAAAGCAC TGTTATCGAT CGGCCGGGTG GCGGTCGTGG ACTGGGACCT GCACCACGGG
AACGGCACAG AGGAGGCGTT CTACACCTCT GATCGGGTGT TCTACTGTTC GGTTCACCAG
GCGGGGATCT TCCCCGGTAC CGGATGGCCG GAAGAGCGGG GAGCCGGTCC GGGTGCGGGG
TATACCGTCA ACGTGCCCCT TGTATCAGGT TCGACCGGCG CCGACTACGC GCTCGTCTTT
AGCCGGGTCT TCGTCCCGAT GCTCCGGTGG TTCGAACCGG ACGTCGTGGT GGTCTCGGCA
GGCCAGGACG CGCTCTTCGA CGACCCGCTC GGTTCCCTCC TTCTTTTGCC CGAAGACTTC
GGGGCGCTGG CGGGGATGCT CGTGGACGCG ACCCCTGCAC CTCTCGCCCT CGTGCTCGAA
GGGGGTTACG GCCGGTCGCA TGCAGGGGCG ATCGGGGCGA TCGTTGCCGC CCTTGACGGC
GCCCGCTTCA ATCCCGCGGG CGGCGGGGCG AAGGCGAGCA CCCGGCACCT CGTGGAGGCG
TATGCCGGCC GCCGGCATGC CGTCCCGCTC TGA
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| Protein sequence | MPYSVVTGDL FSAHDAPGHP ESQARLDAAL AGVPADARRI APERATVDDL ALVHTERHIE
GVRSFCRECP PGRARYLDPD TYVTAGSFDA ALYATGAAWQ AVERALDGEH SFALVRPPGH
HAAPDRAMGF CLFNNVAVAT AKALLSIGRV AVVDWDLHHG NGTEEAFYTS DRVFYCSVHQ
AGIFPGTGWP EERGAGPGAG YTVNVPLVSG STGADYALVF SRVFVPMLRW FEPDVVVVSA
GQDALFDDPL GSLLLLPEDF GALAGMLVDA TPAPLALVLE GGYGRSHAGA IGAIVAALDG
ARFNPAGGGA KASTRHLVEA YAGRRHAVPL
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