Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0587 |
Symbol | |
ID | 4848033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 560677 |
End bp | 562110 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640115269 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001046502 |
Protein GI | 126178537 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00173275 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGATC TGCTGGATAG ATTTGAACCC ATCCTTGCAG CGATGCCTGC AGTCAGGGGG CCGGAAGGGC ACGTCCACTT CAAGAATAAA CTCATGTGGA CGCTTGCCAT CCTGCTTCTC TACTTCTCAT TGACCAACAT CGATATCTTT GGACTCTCTC CGCAGTCACA GGATCTTTTC GGAATGTACC GTGCCCTGCT TGCCGGTGCG AGCGGTTCGC TCCTGCATCT CGGTATCGGG CCGATCGTCA CCGCGTCGAT CGTGCTGCAG CTGCTCAAGG GTGCCGGACT CCTGCAGATC GATACCAGCG AAGCACGCGG GCAGGTCATG TATATGGGCC TGCAGAAACT GCTCATCTTC GTGATGATCA TCGTCGAAGC GTTCCCCATG GTCGCGAGCG GTATGATGCT GCCCGACCCG TCGGTGGCAA CGCAATTCTT CGGCGGCAAT ATGCTCACGG TCTCGCTCCT GATCTTCCTC CAGGTCTGCC TCGGCGGGCT TCTGGTGGTG CTGATGGACG AGGTCGTCAC GAAGTGGGGC GTCGGTTCGG GTGTGGGGCT CTTCATCGTT GCGGGGGTCT CGCAGGGTCT CGTGAACGGG TTCCTGAACT GGCAGACGGG CACCGATCCC TTCCCGATCG GGTTCTTCCC GCGGCTCTTC GCCATAGGGA CCTCGGGAGC GAGTTTCCTC GAGTACTTCG GGACGGACCT GCTCGCCCTC GTCACGACGA TCGCCATCTT CATGGTCATC GTCTACGTGG AGTCGACCCG TATCGAGATC CCGCTCGCGC ATACCGCCGT CCGCGGCGCC CGTGCGCGGT TCCCGGTAAA GCTCATCTAT GCGAGCGTTC TGCCGATGAT TCTCGTCCGG GTGCTGCAGG CGAACATCCA GATGATCGGG ATGTTCCTCT CGAACGCCGG GATAAACATC TTCGGCGAGT TCCAGGGACA AATGCCGACG AGCGGCCTGA TGTGGTATAT CGCGCCGATC AACGCCCCGC AGGACTGGAT GTGGTGGCTC TCCGATCTCG GACACGCCCC CTGGGAGATC ATGTTGCGGA TGGGCATCGA TGTCACCGTT ATGGTGGTCG GGGGCGCAAT CTTCGCGCTC TTCTGGGTCA AGACCGCCGG CCTCGACTCG AAGGACGTGG CCCGGCAGAT CCAGAGAAGC GGGATGCAGA TCCCCGGCTA CCGGCGGAGT GAGCAGGTGC TTGTGAAGTA CCTCGACCGC TACATCCCGC GGATCACCGT CATCGGCGGT GTGTTCATCG GCCTTCTCTC GGTCGTCGCG AACCTCTTCG GTGTGATCGG TGCGGTCGGG GGAACGGGTC TGCTGCTTGC GGTGAGTATC ACCTACCGCC TCTACGAGGA GGTCGCAAGC CAGCAGATCA TGGAGATGTA CCCGTTCATG CGGTCGTTCT TTGGAAAGGA GTAA
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Protein sequence | MGDLLDRFEP ILAAMPAVRG PEGHVHFKNK LMWTLAILLL YFSLTNIDIF GLSPQSQDLF GMYRALLAGA SGSLLHLGIG PIVTASIVLQ LLKGAGLLQI DTSEARGQVM YMGLQKLLIF VMIIVEAFPM VASGMMLPDP SVATQFFGGN MLTVSLLIFL QVCLGGLLVV LMDEVVTKWG VGSGVGLFIV AGVSQGLVNG FLNWQTGTDP FPIGFFPRLF AIGTSGASFL EYFGTDLLAL VTTIAIFMVI VYVESTRIEI PLAHTAVRGA RARFPVKLIY ASVLPMILVR VLQANIQMIG MFLSNAGINI FGEFQGQMPT SGLMWYIAPI NAPQDWMWWL SDLGHAPWEI MLRMGIDVTV MVVGGAIFAL FWVKTAGLDS KDVARQIQRS GMQIPGYRRS EQVLVKYLDR YIPRITVIGG VFIGLLSVVA NLFGVIGAVG GTGLLLAVSI TYRLYEEVAS QQIMEMYPFM RSFFGKE
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