Gene Memar_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0585 
Symbolrpl30p 
ID4847100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp559764 
End bp560225 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content59% 
IMG OID640115267 
Product50S ribosomal protein L30P 
Protein accessionYP_001046500 
Protein GI126178535 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01309] 50S ribosomal protein L30P, archaeal 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0564626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCGG TAGTACAGGT GCGTGGTGTG GTCAAGACCA ACCACGAGAT CAAGGACACC 
TTGAAGATGC TCCGCCTGCA CCACGTGAAC CACTGCGTTC TGGTGCCCGA CACGCCGGCG
TATCTCGGCA TGATTCGCAA GGTGAAGGAC TTCGTGGCGT ACGGGGAGGT TGACAAGGAT
ACCCTGGCCA CCCTCCTGCG CACCCGGGGC AGACTGACCG GGGACGAGAA GCTGACCGAT
GAATACGTCC GCGCGCATAC CCCGTATGCC GACATCGACG AGTTCGCGGC AGCGCTCTGC
GACGGCGAGA TGAGTTTCCG TGATCTGGTG GAGATCAAAC CGGTGCTGAG ACTGCACCCA
CCTCGAAAGG GCTATAAAAC CATCAAGCGA ACCTTTCAGC AGGGTGGAGC TCTCGGCTAC
TATGGTCCCC AGATCAACGA TCTCCTCTAC AAGATGAGGT GA
 
Protein sequence
MYAVVQVRGV VKTNHEIKDT LKMLRLHHVN HCVLVPDTPA YLGMIRKVKD FVAYGEVDKD 
TLATLLRTRG RLTGDEKLTD EYVRAHTPYA DIDEFAAALC DGEMSFRDLV EIKPVLRLHP
PRKGYKTIKR TFQQGGALGY YGPQINDLLY KMR