Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0585 |
Symbol | rpl30p |
ID | 4847100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 559764 |
End bp | 560225 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640115267 |
Product | 50S ribosomal protein L30P |
Protein accession | YP_001046500 |
Protein GI | 126178535 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01309] 50S ribosomal protein L30P, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0564626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCGG TAGTACAGGT GCGTGGTGTG GTCAAGACCA ACCACGAGAT CAAGGACACC TTGAAGATGC TCCGCCTGCA CCACGTGAAC CACTGCGTTC TGGTGCCCGA CACGCCGGCG TATCTCGGCA TGATTCGCAA GGTGAAGGAC TTCGTGGCGT ACGGGGAGGT TGACAAGGAT ACCCTGGCCA CCCTCCTGCG CACCCGGGGC AGACTGACCG GGGACGAGAA GCTGACCGAT GAATACGTCC GCGCGCATAC CCCGTATGCC GACATCGACG AGTTCGCGGC AGCGCTCTGC GACGGCGAGA TGAGTTTCCG TGATCTGGTG GAGATCAAAC CGGTGCTGAG ACTGCACCCA CCTCGAAAGG GCTATAAAAC CATCAAGCGA ACCTTTCAGC AGGGTGGAGC TCTCGGCTAC TATGGTCCCC AGATCAACGA TCTCCTCTAC AAGATGAGGT GA
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Protein sequence | MYAVVQVRGV VKTNHEIKDT LKMLRLHHVN HCVLVPDTPA YLGMIRKVKD FVAYGEVDKD TLATLLRTRG RLTGDEKLTD EYVRAHTPYA DIDEFAAALC DGEMSFRDLV EIKPVLRLHP PRKGYKTIKR TFQQGGALGY YGPQINDLLY KMR
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