| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0569 |
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| Symbol | rpl22p |
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| ID | 4848262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 552627 |
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| End bp | 553088 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640115251 |
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| Product | 50S ribosomal protein L22P |
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| Protein accession | YP_001046484 |
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| Protein GI | 126178519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0413889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAA CAGGTTATTC AGCAACAATT GAGGGCGAGA ACGTCGCTCG CGCAAAAGCG
AACGAACTTC CCGTCTCTCC CAAGCACTCG ATTGAGATTG CCAGGTTCAT CAAGAACATG
ACCACCACCG AGGCAAAGGC ATACCTCACC GACGTGGTGG CGCTGAAGAA GGCCATCCCC
TTCAAGCGGT TCAACCGGAA TGTCGCGCAC AAGCGGGGGC TCTCGAAGTG GCCCGCCGGC
CGGTACCCGG TCAAGGCGGC AGAGGCCTAC ATCAGGCTGC TCGAATCCGT CGAGAAGAAT
GCCGAGTATA TCGGCCTTGA TGTCGAAAAC CTCCGGATCG ACCACGCCGC CGCCAACACC
GGCCGTGGCC TCCGGGCATT CTTCCCGCGT GCGATGGGTC GCGCGACTCC GAAGCGCAGG
GAGACCGTGA ACATCGAGAT CGTCGTGACT GAGGTGGCGT AA
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| Protein sequence | MARTGYSATI EGENVARAKA NELPVSPKHS IEIARFIKNM TTTEAKAYLT DVVALKKAIP
FKRFNRNVAH KRGLSKWPAG RYPVKAAEAY IRLLESVEKN AEYIGLDVEN LRIDHAAANT
GRGLRAFFPR AMGRATPKRR ETVNIEIVVT EVA
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