| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0565 |
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| Symbol | rpl4lp |
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| ID | 4846972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 550472 |
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| End bp | 551221 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640115247 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_001046480 |
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| Protein GI | 126178515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0366247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAC AGGTTCGAAC ACTGACAGGC GAGATCGCCC ACGAGATCGA TCTCCCGGAG
ATCTTTAGAG AAGAATACAG GCCCGACCTG ATTAAGCGGG CAGTCCTCGC GCTCCAGAGC
ACCCGGTTTC AGCCGCACGG AACAAACCCC TATGCGGGCA TGCGCACCTC CGCAGAGTCC
TGGGGCAGCG GCCGGGGTGC CGCGCAGGTC CCCCGCCTGA AGAACGGCAG CAGGGTGGCC
AGGGTTCCGC AGGCAACCGG CGGGCGTGCA GCGCATCCGC CGAAGGTCGA GAAGATCCTC
GTCAAAGAGA TCAACAGAAA AGAGAAGCGC AAAGCGCTCA GGTCCGCCGT CGCCGCCAGC
ACGTACCCCG ACCTTGTCAG GGAACGCGGG CACCTCTTCG AGGGCGACCT CCCGCTGGTC
TTCGAGGACC GGTTTGAAGA GGTCACCCGT ACGGGCGACG TCATCGCGGC GCTCACCGCG
CTCGGTGTCT ATGCCGACGT CGAGCGGGCG AAGGGCAGCC GGAAGGTCCG TGCAGGGCGC
GGCACCATGC GGGGCCGCCG CTACAAGCAG CGCAAGAGCG TTCTCATCGT CACCGGCGGC
GAACCGCTCC GGGCAGCCCG GAACCTTGCG GGCGTCGATG CCGTGGCGGT TGACCAGCTC
AACGCCGAAC TGCTGGCACC CGGCACGCAG GCAGGACGGC TGACGATCTG GACGGAATCT
GCAATCAGGA GACTGGAGGA GTTCTCATGA
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| Protein sequence | MKAQVRTLTG EIAHEIDLPE IFREEYRPDL IKRAVLALQS TRFQPHGTNP YAGMRTSAES
WGSGRGAAQV PRLKNGSRVA RVPQATGGRA AHPPKVEKIL VKEINRKEKR KALRSAVAAS
TYPDLVRERG HLFEGDLPLV FEDRFEEVTR TGDVIAALTA LGVYADVERA KGSRKVRAGR
GTMRGRRYKQ RKSVLIVTGG EPLRAARNLA GVDAVAVDQL NAELLAPGTQ AGRLTIWTES
AIRRLEEFS
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