| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0557 |
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| Symbol | |
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| ID | 4845996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 542638 |
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| End bp | 543645 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640115239 |
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| Product | methylenetetrahydromethanopterin reductase |
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| Protein accession | YP_001046472 |
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| Protein GI | 126178507 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03555] 5,10-methylenetetrahydromethanopterin reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0316712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGTGTA TAGCCTTGAC TACATATGGA ATTGAATTTG TGCCCGGAGC AATCAACGTC
AAGCAGGTGG TGAATTACAC CAAGCTTGCA GAGTCGAAGG ATATCGACTA CGCTTGGATC
ACCAACCACT ACAACAACCG TCATGCCTAC CCGACCCTCG CCATGATCGC GGCAAACACT
GACTCGATCA AGATGGGACC GGGTATCATG AACACGTTCA CCGACACCCC GGCAGCCATT
GCATCCTTCA TGGCTACCTT GAACGAGATC TCCGACGGAC GTGCCGTCCT CGGTATCGGG
CCCGGCGACC TCTCGACGCT CCCGAAGCTC GCGATCGACC CCGTCAAGCC CGTCGGTCAC
CTGAAGGAAG GTGTCGAGCA GATCCGGAAA CTCCTCGCCG GCGAAGAGGT CAAGAAGAGC
GGCAACCTGG AGTTCTTCGA CTACGACGGC GCCAAGCTGA CCGGCGTCAC CCTGCCCGGC
AAGAAGGGCA TTCCGGTCTA CATCGGTGCC CAGGGTCCCA AGGTGCTCGA GCTCGCTGGA
ACCATCGGTG ACGGCGCCCT GATCAACGCT TCGAACCCCA AGGACTTCGA CGTCGCCATC
CCGATCATCA AGAAGGCGAT GGAAGCAGTC GACAAGAAGA AGTTCGACGT CGGCGCCTAC
ACCGCCATGT CCATCGACAG GGACGAGAAG AAGGCCCGGA ATGCCGCAAA GATCGTTGCC
GCATTCATCG CCGCCGGCTC TCCGCCCGCG CTTCTCCAGC GCCACAACCT CAACCTGGAC
AACGTCGCGA AGATCAAGGA AGCGCTCGGA CGCTTCGACT TCAAGACCGT CGGCGGACTC
GTCGGCGACG CGGAGATCGA CGCCTTCACC ATCGCCGGAA CCCCCGACAT GGTCAAGCAG
AAGTGCGAAG ACCTCACAAA GGCTGGAGTT ACTCAGATCA TCTTCGGTTC GCCGCTCGGC
CCCGACATGA CCAACTCCAT CCGCCTCCTC GGCAAGTACA TTGTCTGA
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| Protein sequence | MRCIALTTYG IEFVPGAINV KQVVNYTKLA ESKDIDYAWI TNHYNNRHAY PTLAMIAANT
DSIKMGPGIM NTFTDTPAAI ASFMATLNEI SDGRAVLGIG PGDLSTLPKL AIDPVKPVGH
LKEGVEQIRK LLAGEEVKKS GNLEFFDYDG AKLTGVTLPG KKGIPVYIGA QGPKVLELAG
TIGDGALINA SNPKDFDVAI PIIKKAMEAV DKKKFDVGAY TAMSIDRDEK KARNAAKIVA
AFIAAGSPPA LLQRHNLNLD NVAKIKEALG RFDFKTVGGL VGDAEIDAFT IAGTPDMVKQ
KCEDLTKAGV TQIIFGSPLG PDMTNSIRLL GKYIV
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