Gene Memar_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0553 
Symbol 
ID4847177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp535562 
End bp538570 
Gene Length3009 bp 
Protein Length1002 aa 
Translation table11 
GC content58% 
IMG OID640115234 
Productvon Willebrand factor, type A 
Protein accessionYP_001046468 
Protein GI126178503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.253544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAT GGACGTATGT ATGCCTGGTA GTAGGGCTGC TCTTTCTCGC GGCCCCTGCC 
AGTGCGCTGA TACCTGACGA TATTACCCTT AGCACTGATA AGCCGTGGCT GGTAGCGGGG
AATGGGGAGA CTGCGACCGT CACGATACTG GTCACAAACG GCACTTCTGC CGATCCGGTC
TCCGGTGTCG ACATCGATCT TGCGGTGGAT GGTGAGTATG GGAGCATCTC GCCCGCGCGC
GTGACTACGG GCAGTGACGG AGAGGCCACG GCGACCTTCA GGCACGGGAC GCTTAGCGGG
ACGGCAACGA TCACGGCGAC GGTGTCGGAG GGGGTGGATG TGCCCCTGAC CGGAAGTGTC
GATCAGCAGA TCGATCACGC GGCGGCGCAT AAGATCGCCA ACCTCTGGTA TGAGCCGAAG
GTGACTGCCG GGGAGACGAC GGAGATCGTC GTCCGGATGG TGGATGAGTA CGGAAACCTG
GTGGACAGCA GGAATGTAGC TGAGACTGTG TTCTTCATGG TGGGTTCGCC TGCCTGTTTC
GTTAACGGTA CGGACGAGAT CACGGTGCCG GTGGACGCTG CCGGGAACGT CACTGCAACG
CTCCGGGTCG ACACGACGGC GGGCGGGAAT GTTGTCCTGA TCCAACCCCC GTCGCCGCTT
GTGCTCAAGA GTTTCACCAT CACCGGCGAG GGAGGGCTGC CGGCCGCTAT CACGCAGGAG
ATCACTCCGT CCAGCGGTTC GGTTCCGGCC GACGGGAAGA CGAAGGTTTC GTTCACTTAC
ACGCTGCTCG ATGAGTACGG GAATCCCTCG GGCGAGCAGG GCCTCTGGGT GAACGCTACA
CTGAAACGGT TGAGTCAGCC GGATGAGTAC GAGAGCCGTC TCCTCAACAC CAACTCATAT
GGACAGGTGA TGATCACCTA CGGGCCCGAG GACTCCGTCG GCATGGCCAT CATCACCGCG
ACGGCGGCTG TGAACGAGAG CGTGAGCATA TCGGAGGATG TCGAGTTCAC CAGCACCGAT
CCGACGAACA TGCTCCTCTC CGCAAGCCCG CAGTCGATGC CGAGCCGGGA TGTCAAGGAC
GATTCCGTCT CGAGGATCCG GGCCAAGGTG ATGGACGTCA GGGGTAACCC GGTCGAGGGC
GAGACGGTGA CATTTGATAT CGTGTCGATG AACTCCTCGC CCTATGTGCA ACCTCAGGAT
CCTGTACTGG CGGCGGCATC GGGCGTGACC GACATCGATG GGTATGCGAC TGTGGAGTTC
CACCCTGGTG CGTTCACGAC CGATCCGGAT GTCGCGGGCT GGAGCGACAC CGCGACCGGG
AAGGCGACCG TCCGGGCGAC GTGGGGCAAC GTCAGCCGGG ATATCGAACT CACCTGGAAG
AACTACCCTT ACCTCTCGGT GGAGACGGAG GTCTCCCCCG AGACGGTGGC GGTGAACGAT
ACGGTCGACG TCACAATCCG GTTGAAAGGC GACGGCTGGG CGCTCCAGCC GGACCCGATC
GACGTGGTGC TCTGCACGGA CCGGTCGGGA AGTATGTTGA AGGATTATCC CGATCGCATG
GTCAAGGCGA TGGATGCCTC CAGGATCTTC AATGTCCAGA TAGATCATGG ACGCGACCGA
CTTGGACTTG TGTCCTTTGG CGGCCAGGGG CAGACAAATA TTATTCAGTA TAGCCAGAAC
GTTGGCGGAT GGCTTGGTCG GGATAGCGGG ACTTGGGATG ACTTGAGTTA TCGCACTGCA
AACTATGGTA ACAACAGGTA TTACACTGAA TATGCAACCC TCGATCTTGG ACTGAGCGAC
GATCAATCAG CAATCAACAC CACCATCGCA GGAATGATCC CTGATTCGGG TACGCCTATG
CGGTATGGTA TTTACAAAGC GATCACCGAG TTGAAGGATA ACGGTCGTTC TGATGCCGTG
AAAGCGGTTG TTGTTCTTGG CGACGGTGAG TATAACTACT ATGGCGACCC GCTTGCACGA
GGTACCGGGA GAACTACTAA ATTTGATTGG TCGAATACTC AGAACGATTA TACGTACTTC
TCTGATCTCG GGGCCGCTGA GCAGAGAATG TCTACCTATG CGAACAACCA CAATGTCCGG
CTGTACATGA TATCGTTCTC GGACGACATT GTCAATGGCA GCCACACATG GAATACGATG
GAAACCCTTG CAAGTGAGAC TGGTGGAACG CACTATCATG CGCCCTCCGA CTCCGATCTT
GCTCAGGTTT ACACCGAGAT CGCCGGCGAA CTCAAGACCG AGGCCGGCGT CGATACCGAA
CTGGACGTCG TCTTCGAGAA CGTCGAGGTG AACGGGAATT TAACCACCGG AACCAGTGTG
TTCGACTATG TCAACGAAGA GAATGTATCG ACCACCATCG AGAGCTGGAT CGACAACGAA
ACGGTGCATC ATTATGAGAT CATACCCCGC CATACCCGCG ACGACACGCC GAACTGGACC
GCGGCAAACC CGCACCTCCC CTTCAACATC GGCACCGTGC GCCTCGGCCA GACCTGGGAG
ACGACCTTCA GGCTCGCGGT GAAGACGGAA GGCAACATCA ACATATTCGG CCCGGGTTCG
ACGATCTCGT TCAACAACGG CACCGATTCG CTTGAACTCC CCGACACCTT CATCACGGCC
GTTCCCCTGA ACAACACCGG GATGGACTTT GCGGCGCTGG TGATCGACAA CCTCGTGTTC
ACAGGCACGA TGCCGATCGA TGAGTTCCTC CCGGTCGCCT GGGATCTCAA CTACACCGGT
CTGTACGACG TGACGGAGGA TGTCTTCTAT TCCAACGACA ACGAGTACAC CTGGGTGAAA
TTCGACACGC TCTCCGCCAC GAATACGACG ACGGGCGGAA CGTCCACGCT GGACGTGCGG
GGCCTCCTGC CCGGAGAATA CACCATCTGG GTTCGTGGCT CTGCACCGGA TACCGCGGAC
TCCTCGCAAA AGATTACCAT GGATGTACAT GCCGGGGCGA CCGGAGGCTC GTACATCCGT
ATCCAGTGA
 
Protein sequence
MNGWTYVCLV VGLLFLAAPA SALIPDDITL STDKPWLVAG NGETATVTIL VTNGTSADPV 
SGVDIDLAVD GEYGSISPAR VTTGSDGEAT ATFRHGTLSG TATITATVSE GVDVPLTGSV
DQQIDHAAAH KIANLWYEPK VTAGETTEIV VRMVDEYGNL VDSRNVAETV FFMVGSPACF
VNGTDEITVP VDAAGNVTAT LRVDTTAGGN VVLIQPPSPL VLKSFTITGE GGLPAAITQE
ITPSSGSVPA DGKTKVSFTY TLLDEYGNPS GEQGLWVNAT LKRLSQPDEY ESRLLNTNSY
GQVMITYGPE DSVGMAIITA TAAVNESVSI SEDVEFTSTD PTNMLLSASP QSMPSRDVKD
DSVSRIRAKV MDVRGNPVEG ETVTFDIVSM NSSPYVQPQD PVLAAASGVT DIDGYATVEF
HPGAFTTDPD VAGWSDTATG KATVRATWGN VSRDIELTWK NYPYLSVETE VSPETVAVND
TVDVTIRLKG DGWALQPDPI DVVLCTDRSG SMLKDYPDRM VKAMDASRIF NVQIDHGRDR
LGLVSFGGQG QTNIIQYSQN VGGWLGRDSG TWDDLSYRTA NYGNNRYYTE YATLDLGLSD
DQSAINTTIA GMIPDSGTPM RYGIYKAITE LKDNGRSDAV KAVVVLGDGE YNYYGDPLAR
GTGRTTKFDW SNTQNDYTYF SDLGAAEQRM STYANNHNVR LYMISFSDDI VNGSHTWNTM
ETLASETGGT HYHAPSDSDL AQVYTEIAGE LKTEAGVDTE LDVVFENVEV NGNLTTGTSV
FDYVNEENVS TTIESWIDNE TVHHYEIIPR HTRDDTPNWT AANPHLPFNI GTVRLGQTWE
TTFRLAVKTE GNINIFGPGS TISFNNGTDS LELPDTFITA VPLNNTGMDF AALVIDNLVF
TGTMPIDEFL PVAWDLNYTG LYDVTEDVFY SNDNEYTWVK FDTLSATNTT TGGTSTLDVR
GLLPGEYTIW VRGSAPDTAD SSQKITMDVH AGATGGSYIR IQ