| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0476 |
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| Symbol | |
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| ID | 4847307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 461965 |
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| End bp | 463137 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640115155 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001046391 |
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| Protein GI | 126178426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.204681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA CTGCATTGAT CATTGCCCTG ATCGTCGCTC TGGTTCCGGC GGCTGCCGGG
GCGGAGGGGG CCTATCACGG CGTATCGACG GGGGGCATCG TCAACGACGT TGCGATCACC
GCCGACGGAA AGTATATGGT CGCGGGGACG GGCGACGGGG AGATCGTCTG CCTGCAGCGG
GACGGTACCG TCCCCTGGAA CGCGAGCGCC CCAGGTGCGG TGACCGCGGT TGCCGCCGCC
GGGGACTACG TTGCCGCCGG AACCGAGGGG GGCGACGTGC TCCTCTTCGA TGGGAACGGC
GGCCGCTACT GGACGAAGAG CGTCACGGGA TCCGTTCGCG ACCTTGCTTT CGCAGGTGAC
GGGCGGGCGA TCGCCGTAGC GGGCGATCGC ATCGTTCTCT TCACCAACCT CGGGAAGGAG
GAATGGAACC GCGCCGTGCA GCCGGGCGCT CGTTCCAGCG ACACCAAACC GTACGTCACG
TCCGTCGCTT TCACGCAGGA CGGCAAATTC ATCGTCACCG GGAGCAGCAA CGGTGCCATC
CTCTTCATGA ACCGGGAGGG AAACCTGATC TGGGAGGGGC TTGCCCGTGA CGTAGTTACC
GCGGTCGACG TCTCACGTGA CGGATCGGTC GTCGCCGCCG GAGGCCGGGA TCGCGCGCTC
CAGGTTTACG GCCGGGCAGG GGGTCTCCCC TGGGCGCTGC CTACCGGAGC GCCGATCCTG
GCGCTCGCTC TCTCCGGTGA CGGGAAGTTC GCGGTCGTCG GCAAAGAGGG CGGCGACGTG
GAGTGTTACC GGCCGAACGA CGACCTGCTC TGGAAGAACC GGACGGGAAG CAACGTCATC
GCCGTGGACG TCTCCCGGCG GGGCGAGGCC GTCGCGGCAG GGAACGCAGG CGGAACCGTG
TACCTCTGGA ACGGCAACGG CGACGCACGC TGGTCGTTCG ATGCCGGTGC AGCCGTTAGC
GCAGTTACCC TCTCGGACAA CGGCGACTAC CTCGCGGCGG GTGCGGGAGA GCGGGCCTAC
ATCTTCCGGA CGGCCGACGA TCCGATGACG GCGATGGCGG AAGGGACCGG GAACACCACG
CCGGAACCGA CCGAGGCCGG AGGGGCGGGC GCGCTCATCG GGCTCCTCGC CGTCGCTGCC
GCGGGCGCCG CGGGTCGTCT CCGGCGGCGG TGA
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| Protein sequence | MKRTALIIAL IVALVPAAAG AEGAYHGVST GGIVNDVAIT ADGKYMVAGT GDGEIVCLQR
DGTVPWNASA PGAVTAVAAA GDYVAAGTEG GDVLLFDGNG GRYWTKSVTG SVRDLAFAGD
GRAIAVAGDR IVLFTNLGKE EWNRAVQPGA RSSDTKPYVT SVAFTQDGKF IVTGSSNGAI
LFMNREGNLI WEGLARDVVT AVDVSRDGSV VAAGGRDRAL QVYGRAGGLP WALPTGAPIL
ALALSGDGKF AVVGKEGGDV ECYRPNDDLL WKNRTGSNVI AVDVSRRGEA VAAGNAGGTV
YLWNGNGDAR WSFDAGAAVS AVTLSDNGDY LAAGAGERAY IFRTADDPMT AMAEGTGNTT
PEPTEAGGAG ALIGLLAVAA AGAAGRLRRR
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