| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0470 |
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| Symbol | |
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| ID | 4847342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 455974 |
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| End bp | 456621 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640115148 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001046385 |
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| Protein GI | 126178420 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.296662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATCACA TCGACGTCCA CGTGGAGAAG GACATCTACG ATGTCAACAA CCGCCTTGCA
GATGCCAACG CAGCCCACCT CAAAGACCAC GGCATCCGGG CGTTCGATCT TCTCGGCGCC
ATCGGGTCGG GGAAGACCGC CACGATCGAG CGGCTGGTGC CGCTTATCCG GAAGCGGGGC
CTCCGCGCCG GCGCCATCGC CGGGGACGTC TACGGCGACG ACGACTTCAA GCGGATCGTT
GCACTCGACG TCCCGGCCTA CAACGCGAAC ACCGGGAAGG AGTGTCACCT CGACGCCCAC
CTGGTGGAGC ACGCCATCGA ACACCTCCCG CTCGATGAGA TCGATATCCT CTTCATCGAG
AACGTCGGCA ACATGGTCTG CCCGACCGAC TTCCGGCTGG GCGCCGAGAA GAGGATCGTC
GTCGTCAGCT CGACAGAAGG GGATGACGTG GTGAACAAGC ACCCGATGAT GTTTAGAAGC
AGCAACATCG GCGTCATCAA CAAGGTCGAC CTCGCCGGGT TCGTCGGCGC CGACCTCGAT
CGGATGGAGG CGGATATGCG CCGCTACAAC CCGGAGATGA AGATCTTCCG GACGAACATG
AAGACCGGAA AAGGGTTGGA CGAGCTGCTG GACGCGATCC TCGCGTGA
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| Protein sequence | MHHIDVHVEK DIYDVNNRLA DANAAHLKDH GIRAFDLLGA IGSGKTATIE RLVPLIRKRG
LRAGAIAGDV YGDDDFKRIV ALDVPAYNAN TGKECHLDAH LVEHAIEHLP LDEIDILFIE
NVGNMVCPTD FRLGAEKRIV VVSSTEGDDV VNKHPMMFRS SNIGVINKVD LAGFVGADLD
RMEADMRRYN PEMKIFRTNM KTGKGLDELL DAILA
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