| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0469 |
|---|
| Symbol | |
|---|
| ID | 4846051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 455492 |
|---|
| End bp | 455869 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640115147 |
|---|
| Product | 30S ribosomal protein S8e |
|---|
| Protein accession | YP_001046384 |
|---|
| Protein GI | 126178419 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2007] Ribosomal protein S8E |
|---|
| TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.968411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGGC AAGGAAGATC AGTACGGAAG CCATCGGGCG GACGCTACCA CACCTCCCAG
GGCAAAAAGA GAACGGAGAT CGGAAGAGCT CCGGCAGAGA CGCATATCGG TGAAGAACGC
AGGAGAATTG TCCGCACCTT CGGCGGCAAC CAGAAGGTCC GGGCACTCCG GTTAGAGTAC
GCAACGGTCT CGAACCCCGC AACCGGCGAG ACCAAAAAGA CGAAGATCGA GGCGGTCGAG
GCAAACAGCG CCGACCCGAA CTACGTCCGG CGGAAACTCC TGACGAAGGG CGCCATCATC
AAGACCGAGA TGGGGCGCGC GCGGATCGTC AGCAGACCGA GCCAGGACGG CGTCGTCAAC
GCCGTTCTGC TCGCATAA
|
|---|
| Protein sequence | MQWQGRSVRK PSGGRYHTSQ GKKRTEIGRA PAETHIGEER RRIVRTFGGN QKVRALRLEY
ATVSNPATGE TKKTKIEAVE ANSADPNYVR RKLLTKGAII KTEMGRARIV SRPSQDGVVN
AVLLA
|
|---|
| |