| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0462 |
|---|
| Symbol | |
|---|
| ID | 4847941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 450578 |
|---|
| End bp | 450976 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640115140 |
|---|
| Product | 30S ribosomal protein S6e |
|---|
| Protein accession | YP_001046377 |
|---|
| Protein GI | 126178412 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2125] Ribosomal protein S6E (S10) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.206866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATT TCAAAATCAT ACTATCAGAC CCGGAGACCG GACGTTCATA TAAGATCGAT
GCGACCGGCC CCGCCGCCGG AGGGTTCGTC GGCAAGCGCA TCGGCGACGA GATCGACGGT
GACGTCCTCG GCTTTGCGGG CTACACGATC AAGATCACCG GTGCCACGGA CAAGACCGGC
ATTCCCTCGC GCCGCGACCT TCCCGGCCCG TCCCGGAGGA GGCTTCTCCT CTCCAAGGGC
GTCGGGTTCC ACCCGGTCAT GGACGGGGAA CGCCGCAGGA AGTCGGTGCG GGGCAACGAG
ATCAGCGCCG ATATCGTTCA GATCAACGCC GCCGTAACAC AGAGCGGTGC AAAACCTCTG
GCAGAATACT TCAGCCAGCC CGAGGCGGCG GCTGAATAA
|
|---|
| Protein sequence | MADFKIILSD PETGRSYKID ATGPAAGGFV GKRIGDEIDG DVLGFAGYTI KITGATDKTG
IPSRRDLPGP SRRRLLLSKG VGFHPVMDGE RRRKSVRGNE ISADIVQINA AVTQSGAKPL
AEYFSQPEAA AE
|
|---|
| |