Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0458 |
Symbol | |
ID | 4848167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 444765 |
End bp | 445439 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640115135 |
Product | bacterio-opsin activator |
Protein accession | YP_001046373 |
Protein GI | 126178408 |
COG category | [R] General function prediction only |
COG ID | [COG3413] Predicted DNA binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.484707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCG AGGTCTGCCT GAAGGATCCG TTGATGGGCA TGCCCGCCGA CGCAGAGGTT CTCAACCAGG CGGTGCAGCA CTTCATGGAT AGGGTCGAAT CTGTCAGGCT CGTCGAGTTG CTCAAGATGA ACTTTGAGCG GGGGGAGGAG ACGGTGATTG CCGAGATCAC GATGAAAGCG GGATACACCG CGAACGACCT TGAGCTCCCG GAAGTTCTCG GTTCTCTTGA GGTGCTCAAG GCCGACGGCC GGACGTATAC CTGCTTTCTG CGATGTGTCA TCCAGGACGA GTTCCTGCTG GAGAAGATGC GCGAGTTCGA CCTGGATATT ATCTGGACGT TGCCCATGTA CAAGTCCCGC GACCTGTATG TCTACACCTG CATCGGCGAC GCCGAGAACC TGAACAAAGT TCTCCTTCTC ATGTCCACCT ACGGCGAGAT CCAGAACGTC ATCTTCGAGG AAGCAACCTT TTCCGGGAAC AATCCCCTCT CACGGCTCAC TCCCCGGCAG AGGGACCTGC TGATCGCGGC AAAACAGTAT GGCTACTACG AGTACCCTCG TAAGATCAAC AGCCAGCAGC TGGCGGAGAA GGTGGGCATC AGCAAAGCCA CCGCGATAGA GCACCTGCGA AAGGCGGAGG CACGGCTCAT TGCCACGCTC CTTGCCGGCT ACTGA
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Protein sequence | MILEVCLKDP LMGMPADAEV LNQAVQHFMD RVESVRLVEL LKMNFERGEE TVIAEITMKA GYTANDLELP EVLGSLEVLK ADGRTYTCFL RCVIQDEFLL EKMREFDLDI IWTLPMYKSR DLYVYTCIGD AENLNKVLLL MSTYGEIQNV IFEEATFSGN NPLSRLTPRQ RDLLIAAKQY GYYEYPRKIN SQQLAEKVGI SKATAIEHLR KAEARLIATL LAGY
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