Gene Memar_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0458 
Symbol 
ID4848167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp444765 
End bp445439 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID640115135 
Productbacterio-opsin activator 
Protein accessionYP_001046373 
Protein GI126178408 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.484707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCG AGGTCTGCCT GAAGGATCCG TTGATGGGCA TGCCCGCCGA CGCAGAGGTT 
CTCAACCAGG CGGTGCAGCA CTTCATGGAT AGGGTCGAAT CTGTCAGGCT CGTCGAGTTG
CTCAAGATGA ACTTTGAGCG GGGGGAGGAG ACGGTGATTG CCGAGATCAC GATGAAAGCG
GGATACACCG CGAACGACCT TGAGCTCCCG GAAGTTCTCG GTTCTCTTGA GGTGCTCAAG
GCCGACGGCC GGACGTATAC CTGCTTTCTG CGATGTGTCA TCCAGGACGA GTTCCTGCTG
GAGAAGATGC GCGAGTTCGA CCTGGATATT ATCTGGACGT TGCCCATGTA CAAGTCCCGC
GACCTGTATG TCTACACCTG CATCGGCGAC GCCGAGAACC TGAACAAAGT TCTCCTTCTC
ATGTCCACCT ACGGCGAGAT CCAGAACGTC ATCTTCGAGG AAGCAACCTT TTCCGGGAAC
AATCCCCTCT CACGGCTCAC TCCCCGGCAG AGGGACCTGC TGATCGCGGC AAAACAGTAT
GGCTACTACG AGTACCCTCG TAAGATCAAC AGCCAGCAGC TGGCGGAGAA GGTGGGCATC
AGCAAAGCCA CCGCGATAGA GCACCTGCGA AAGGCGGAGG CACGGCTCAT TGCCACGCTC
CTTGCCGGCT ACTGA
 
Protein sequence
MILEVCLKDP LMGMPADAEV LNQAVQHFMD RVESVRLVEL LKMNFERGEE TVIAEITMKA 
GYTANDLELP EVLGSLEVLK ADGRTYTCFL RCVIQDEFLL EKMREFDLDI IWTLPMYKSR
DLYVYTCIGD AENLNKVLLL MSTYGEIQNV IFEEATFSGN NPLSRLTPRQ RDLLIAAKQY
GYYEYPRKIN SQQLAEKVGI SKATAIEHLR KAEARLIATL LAGY