Gene Memar_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0429 
Symbol 
ID4848040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp414252 
End bp415469 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID640115104 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001046344 
Protein GI126178379 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTG ACGCCGCTGC TGCAAGCCTG GCCGACCACC TGCTCGAGCA GGAGTTCGTG 
GAGGTGCTGG CGCACCACGA TGCCGACGGT ATAGCCGCCG CATCCATCCT CTGCCACGCC
ATGTTCCGCG AGGGCGGACG GTTCCGGCTG AGGATCCGCC CGGGCATCTC CACGGCCGAC
CTCCCCGGCG ACGGCAGCGT GCTTCTCTGC GACTTCGGAT CGGCACTCAC GGACCTCCCC
GGCGACGTCA TGGTGGTGGA TCACCACCTG CCCCGTTTCG AGGGGGACTA TCACGTCAAC
CCGCACCTCG CCGGGATCGA CGGCGACCGG GACATCTCGG CGGCCGGCGC GGCCTACCTC
GTCGCCCAGC GCATGGGCGA CAACCGTGAT CTCGCGGGGC TCGCGCTCCT CGGGATCATC
GGGGACGACC AGGCACTCGA CGGTCCGAAC AGGGAGATCG TGAACGAAGG CATCGCAAAC
GGGTTCATAG CACCCCGCCG CGGCCTCCGT CTCCCGGGAA GAGGGCTTGT CGAGCAGCTC
GCGCTTGCCG TCGACCCCTA CCTTCCCGGG TTCTCCGGCG TTCCCGACAG AGCGAGGACG
CTCGTTGCAG AGGTCACCGA CGAGGACGAC ATGGACATCG AGTCGCTCCT CACCCGGATC
GTCCTCGCAG CCGCCCCGAA CGCCTCGGTC TCCGCACTCT GCGGGATCTG GGGCACCACC
TACAGCCTCG GCCGGGAGGT GATCGATGAG GCCCTGAATC TCGCTGCCGT CGTCGACGCC
TGCGGCAAGG CAGGGAACGG GGACATCGGC GCATCGCTCT GTCTCCGCTC GAGCCACGCG
ATCCAGGAAG CCTGGGAGAT CACCGCCCGC TACCGGCAGG CGGTCGTCAC CGGCATCCAC
GGGGCGCGCC GCCTCGACGA GCGCGTCGCC CTCTTTGCAG TGGACGACGG GTCGGTCGCA
AGCGACGTCG CAGACGCGCT CGCAAACGAC TTCGTCCGGA GCGGCCCGGT CTTCGTCATC
GGCAGGATCG GCGACCACTG CTCCGTCTCG GCACGCTGTC CTCCGGGGAT CGACCTCGAC
CTCGAAGCGG TGATGCGAAC GATCGCGGAG GCATGCGGCG GCCAGGGCGG CGGACACCGC
CTGAGGGCCG GAGCCCGGAT TGCCGCCGAC CAGGCGGACC AGTTCAGGCA CGAACTCCTG
GAGGCGATCC CCGCATGA
 
Protein sequence
MSLDAAAASL ADHLLEQEFV EVLAHHDADG IAAASILCHA MFREGGRFRL RIRPGISTAD 
LPGDGSVLLC DFGSALTDLP GDVMVVDHHL PRFEGDYHVN PHLAGIDGDR DISAAGAAYL
VAQRMGDNRD LAGLALLGII GDDQALDGPN REIVNEGIAN GFIAPRRGLR LPGRGLVEQL
ALAVDPYLPG FSGVPDRART LVAEVTDEDD MDIESLLTRI VLAAAPNASV SALCGIWGTT
YSLGREVIDE ALNLAAVVDA CGKAGNGDIG ASLCLRSSHA IQEAWEITAR YRQAVVTGIH
GARRLDERVA LFAVDDGSVA SDVADALAND FVRSGPVFVI GRIGDHCSVS ARCPPGIDLD
LEAVMRTIAE ACGGQGGGHR LRAGARIAAD QADQFRHELL EAIPA