| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0425 |
|---|
| Symbol | |
|---|
| ID | 4847528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 411495 |
|---|
| End bp | 412730 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640115100 |
|---|
| Product | phosphonopyruvate decarboxylase-related protein |
|---|
| Protein accession | YP_001046340 |
|---|
| Protein GI | 126178375 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
|---|
| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.7315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTG AGAAGGTTCT CTTCCTGGTA CTGGACGGGA TCTCCGACCG CCCCTGCGAA
GCGCTGGACG GATTGACCCC GCTCGCCGCC GCACGGACCC CGGTTCTCGA CAGGCTCGCC
GCCGAGGGCG TATGCGGGAT CATGGACTCC GTCGCGCCCG GGATACGGCC CGGGTCCGAC
ACCTCCCACC TCGCCCTGCT CGGCTACCCG CCGCAGGAGT TCTACACCGG CCGGGGCCCG
CTCGAGGCCG AAGGGACCGG CATCCACATG ACCGCCGGGA TGATCGGGTT TCGGTGCAAT
TTCGCCACCG TGGACGCGGA CGGCCTCGTC ACCGATCGCC GGGCCGGCCG GATCTCCGGG
ACGGAACCAC TTGCAGAAGC CATCCGGGAG GGTGTCGACC TCTCGGGGCT CGGTCTTGAG
TTCCGGTTCG AGGCGGGCGC CGGTCACCGG GCGGCCCTCG CCCTAATCGG GGAAGGACTC
GGCGATAAGG TCTCCTCGAA CGACCCAAAG AAAGAGGGAG TACAGCCGCT CACGATCCGG
CCCGGATCCG ACGATCCGGC GGACGCAAAG ACCGCCCGCG CCTGCAACGA GTTCATCCGC
CAGTCCAGAG AGATCCTCGA CGGCCACCCG GTGAACGTCC GGCGGATGGA AGAGGGGCTC
CCGCCAGGAA ATCTCCTCCT GATCCGGGGC GCCGGGAAGA TGGGCGCGCT CCCGCAGTTC
CCCGAGCGGT ACGGGCTCTC CGGGAGCGTC ATCTCGGCGG CCACCCTCAT CTCCGGGATC
GGGATGGTCG TGGGGCTCGA GCACATCCCG GTGCCGGGAA CGACCGGTTC GGTCGACTCC
GATCTCGACG CCAAGGTGAG GGCGGCGATA GGGGAACTCG GCCGGAAAGA CTTCGTGCTG
ATGAACATCA AGGGTGCGGA CGAGGCCGGC CACGACGGCA AAAGCATCCA GAAACGCGAC
TTCATCGAAG TGATCGACAA GGCGCTCGCG CCGCTGCTCG ATCTCAAGAA CACCCTGATC
CTCGTCTGCG CCGACCACAG CACGCCCTGC TCGGTCAAAG ATCACAGCGC CGACCCGGTT
CCGGTCGTCA TCAGGGGCCC GGGTGTCCGG ATCGACCGGA CGAACCGGTT CGACGAGGTC
TCGTGCGCGG AGGGCGGGCT CCACCGTATC CGCGGTCGCG ATCTCATGCC GATTATCCTG
GATCTAATTA ATAAGAGTCA TAAGTATGGC GCATGA
|
|---|
| Protein sequence | MIAEKVLFLV LDGISDRPCE ALDGLTPLAA ARTPVLDRLA AEGVCGIMDS VAPGIRPGSD
TSHLALLGYP PQEFYTGRGP LEAEGTGIHM TAGMIGFRCN FATVDADGLV TDRRAGRISG
TEPLAEAIRE GVDLSGLGLE FRFEAGAGHR AALALIGEGL GDKVSSNDPK KEGVQPLTIR
PGSDDPADAK TARACNEFIR QSREILDGHP VNVRRMEEGL PPGNLLLIRG AGKMGALPQF
PERYGLSGSV ISAATLISGI GMVVGLEHIP VPGTTGSVDS DLDAKVRAAI GELGRKDFVL
MNIKGADEAG HDGKSIQKRD FIEVIDKALA PLLDLKNTLI LVCADHSTPC SVKDHSADPV
PVVIRGPGVR IDRTNRFDEV SCAEGGLHRI RGRDLMPIIL DLINKSHKYG A
|
|---|
| |