| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0415 |
|---|
| Symbol | rpl12p |
|---|
| ID | 4846117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 398271 |
|---|
| End bp | 398588 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640115090 |
|---|
| Product | 50S ribosomal protein L12P |
|---|
| Protein accession | YP_001046330 |
|---|
| Protein GI | 126178365 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2058] Ribosomal protein L12E/L44/L45/RPP1/RPP2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.18162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATA TCTACGCTGC ACTGCTCCTG CACAACGCAG GCAAAGATGT AACTGAAGAG
AATGTGACTG CTGTCCTGAA CGCGGCCGGT GTCGAGGTCC AGGACGCCCG CGTGAAGGCG
CTCGTCGCCG CACTCGAGGA CGTGAACATC GAGGAGGCCA TCAGCAAGGC CGCCGTCGCG
CCCGTCGCCG CTGCACCCGC CGCAGCCGCT GCACCTGCAG CCGCCGCGCC CGCAGCCGAG
GAAGAGGCCG AGGAAGAGGG CAAGAAGGAA GAGGAAGAAG AGAGCGGCAT GGCCGGTCTC
GGCGCCCTCT TCGGCTAA
|
|---|
| Protein sequence | MEYIYAALLL HNAGKDVTEE NVTAVLNAAG VEVQDARVKA LVAALEDVNI EEAISKAAVA
PVAAAPAAAA APAAAAPAAE EEAEEEGKKE EEEESGMAGL GALFG
|
|---|
| |