Gene Memar_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0397 
Symbol 
ID4846873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp378838 
End bp380340 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content60% 
IMG OID640115072 
ProductTrkA domain-containing protein 
Protein accessionYP_001046312 
Protein GI126178347 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0569] K+ transport systems, NAD-binding component
[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.377542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCC TTAATACCAT GAGAAGTTAC ACCATTGTAC GCATGCCTGA GGCGGTCCAG 
AACGTTTCGA AAGAACGTAT CAAATACATC ATTCTTGGCT GCGGGAGCAC CGGCTACAAT
GTCGCCGAGG AGCTCGAGCA GGAGAACGAA GATCTCATCA TCGTCGATAA GGACGAGAAG
CGGGTGGAAG ATCTCCGCGA TCAGAAGTAC GAAGCGCTCG TTCGCGACCT CCGGGACCCG
AACTTCATGG AAGGGCTGCC CGTGCCGGAG GTCGCGTTCA TCCTCGCGAA CGACCGGGAG
GCCAATCTGA CCGCGCTCCA GACCGTCAAG AACCGGTACC CGGCGACATA CGTCATCGCA
CGCGCCACCG ACCCGGTCAG CGTCGACCTT CTCCAGCAGG AAGGCGCCGA TATCGTCCTC
TACCCGCAGG AGGTGGTTGC GAGAACCGCC ATCCACCACA TCAGGAAGCT CCAATCATCG
AGGCTCGCCC TGCGGCTCTA CGATATGCTC GCCTCCTGGG AGGGGACGCT CTGCATCGTC
ACCCACCTGA ATCCCGACCC CGACTCGATA TCGAGCGCGA TGGCGCTCTC GATGATTGCG
CGGCACGCGA GCCGCAACAA GCTCAACTGC CGCATCGTCT ACGAAGGGGA TATCGGGCAC
CAGGAGAACC GGGCGTTCAT CAATCTCCTC GATATCAAGC TGGAGCGGCT CACCCCCCAG
ATCCTCGAAG AGTGCGACTA CATCGCTCTG GTCGACTCGT CGGGGCCCGG CGTGAACAAC
GAGCTTCCCA GGTCGACCCG GGTCAACATC ATCATCGACC ACCACAAGAA CGGCGAGCAC
CCGTCTACCG TCGCCGACTT CATCGACATC AGGCCGGGGG TCGGCGCCAC GGCAAGCATC
ATGACCCAGT ACCTGATGGA ACTCGATATC CCGGTGAACA AGTCGGTGGC CACCGCGCTC
CTTTACGGTA TCAGGGCAGA CACCCGTGAC TTCAAGCGGA ACGTCACCCC CCAGGACCTC
AACTACGCGG CGTTCCTCCT TCCCCTGACC GACTCGGATC TCCTCGATAA GATCACCTCC
CCTTCCATGT CGCTCGAGAC CGTGGAGATC ATCGGGAACG CCATCCGGAA CCGCCGGATC
AAGAGCGGTT ACCTCTTCTC GAACGTCGGC TACATCAGGA ACCGCGACGC TCTCCCGCAG
GCGGCCGACA TGCTGATCCA CCTCGAGGGC GTGAATACGG CACTGGTCTA CGGCATCAGC
GACCAGAACA TCGTCATCTC GGCAAGAAAC AAGGATATCA GGCTCCATCT CGGCAACGTG
ATGGCCGAAG CGTTCGGGCC TATCGGCGAG GCCGGCGGGC ACGCCACGAT GGCGGCCGCC
CTGATTCCGC TCAACTACTT CTCCATGGCG AAGGAGAAGG AGGGTCTGCT CGAGCTGATC
ATCGATCCGA TCCTGAAGAG GTTCTCGAGC ATCGTCGGCC TGGACGACGA GGATAAACAA
TGA
 
Protein sequence
MESLNTMRSY TIVRMPEAVQ NVSKERIKYI ILGCGSTGYN VAEELEQENE DLIIVDKDEK 
RVEDLRDQKY EALVRDLRDP NFMEGLPVPE VAFILANDRE ANLTALQTVK NRYPATYVIA
RATDPVSVDL LQQEGADIVL YPQEVVARTA IHHIRKLQSS RLALRLYDML ASWEGTLCIV
THLNPDPDSI SSAMALSMIA RHASRNKLNC RIVYEGDIGH QENRAFINLL DIKLERLTPQ
ILEECDYIAL VDSSGPGVNN ELPRSTRVNI IIDHHKNGEH PSTVADFIDI RPGVGATASI
MTQYLMELDI PVNKSVATAL LYGIRADTRD FKRNVTPQDL NYAAFLLPLT DSDLLDKITS
PSMSLETVEI IGNAIRNRRI KSGYLFSNVG YIRNRDALPQ AADMLIHLEG VNTALVYGIS
DQNIVISARN KDIRLHLGNV MAEAFGPIGE AGGHATMAAA LIPLNYFSMA KEKEGLLELI
IDPILKRFSS IVGLDDEDKQ