Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0397 |
Symbol | |
ID | 4846873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 378838 |
End bp | 380340 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640115072 |
Product | TrkA domain-containing protein |
Protein accession | YP_001046312 |
Protein GI | 126178347 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0569] K+ transport systems, NAD-binding component [COG0618] Exopolyphosphatase-related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.377542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCCC TTAATACCAT GAGAAGTTAC ACCATTGTAC GCATGCCTGA GGCGGTCCAG AACGTTTCGA AAGAACGTAT CAAATACATC ATTCTTGGCT GCGGGAGCAC CGGCTACAAT GTCGCCGAGG AGCTCGAGCA GGAGAACGAA GATCTCATCA TCGTCGATAA GGACGAGAAG CGGGTGGAAG ATCTCCGCGA TCAGAAGTAC GAAGCGCTCG TTCGCGACCT CCGGGACCCG AACTTCATGG AAGGGCTGCC CGTGCCGGAG GTCGCGTTCA TCCTCGCGAA CGACCGGGAG GCCAATCTGA CCGCGCTCCA GACCGTCAAG AACCGGTACC CGGCGACATA CGTCATCGCA CGCGCCACCG ACCCGGTCAG CGTCGACCTT CTCCAGCAGG AAGGCGCCGA TATCGTCCTC TACCCGCAGG AGGTGGTTGC GAGAACCGCC ATCCACCACA TCAGGAAGCT CCAATCATCG AGGCTCGCCC TGCGGCTCTA CGATATGCTC GCCTCCTGGG AGGGGACGCT CTGCATCGTC ACCCACCTGA ATCCCGACCC CGACTCGATA TCGAGCGCGA TGGCGCTCTC GATGATTGCG CGGCACGCGA GCCGCAACAA GCTCAACTGC CGCATCGTCT ACGAAGGGGA TATCGGGCAC CAGGAGAACC GGGCGTTCAT CAATCTCCTC GATATCAAGC TGGAGCGGCT CACCCCCCAG ATCCTCGAAG AGTGCGACTA CATCGCTCTG GTCGACTCGT CGGGGCCCGG CGTGAACAAC GAGCTTCCCA GGTCGACCCG GGTCAACATC ATCATCGACC ACCACAAGAA CGGCGAGCAC CCGTCTACCG TCGCCGACTT CATCGACATC AGGCCGGGGG TCGGCGCCAC GGCAAGCATC ATGACCCAGT ACCTGATGGA ACTCGATATC CCGGTGAACA AGTCGGTGGC CACCGCGCTC CTTTACGGTA TCAGGGCAGA CACCCGTGAC TTCAAGCGGA ACGTCACCCC CCAGGACCTC AACTACGCGG CGTTCCTCCT TCCCCTGACC GACTCGGATC TCCTCGATAA GATCACCTCC CCTTCCATGT CGCTCGAGAC CGTGGAGATC ATCGGGAACG CCATCCGGAA CCGCCGGATC AAGAGCGGTT ACCTCTTCTC GAACGTCGGC TACATCAGGA ACCGCGACGC TCTCCCGCAG GCGGCCGACA TGCTGATCCA CCTCGAGGGC GTGAATACGG CACTGGTCTA CGGCATCAGC GACCAGAACA TCGTCATCTC GGCAAGAAAC AAGGATATCA GGCTCCATCT CGGCAACGTG ATGGCCGAAG CGTTCGGGCC TATCGGCGAG GCCGGCGGGC ACGCCACGAT GGCGGCCGCC CTGATTCCGC TCAACTACTT CTCCATGGCG AAGGAGAAGG AGGGTCTGCT CGAGCTGATC ATCGATCCGA TCCTGAAGAG GTTCTCGAGC ATCGTCGGCC TGGACGACGA GGATAAACAA TGA
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Protein sequence | MESLNTMRSY TIVRMPEAVQ NVSKERIKYI ILGCGSTGYN VAEELEQENE DLIIVDKDEK RVEDLRDQKY EALVRDLRDP NFMEGLPVPE VAFILANDRE ANLTALQTVK NRYPATYVIA RATDPVSVDL LQQEGADIVL YPQEVVARTA IHHIRKLQSS RLALRLYDML ASWEGTLCIV THLNPDPDSI SSAMALSMIA RHASRNKLNC RIVYEGDIGH QENRAFINLL DIKLERLTPQ ILEECDYIAL VDSSGPGVNN ELPRSTRVNI IIDHHKNGEH PSTVADFIDI RPGVGATASI MTQYLMELDI PVNKSVATAL LYGIRADTRD FKRNVTPQDL NYAAFLLPLT DSDLLDKITS PSMSLETVEI IGNAIRNRRI KSGYLFSNVG YIRNRDALPQ AADMLIHLEG VNTALVYGIS DQNIVISARN KDIRLHLGNV MAEAFGPIGE AGGHATMAAA LIPLNYFSMA KEKEGLLELI IDPILKRFSS IVGLDDEDKQ
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