Gene Memar_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0389 
Symbol 
ID4846490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp369211 
End bp370410 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID640115063 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_001046304 
Protein GI126178339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA CGATTCTGGA GCAGCAGGTG CGGAGGACGG AGGGGCCGGA GTTCTTCTCA 
TCCGAAGATG TCGTAGGAAA GCGGGTGAAG AACCCGGAAG GTTACGATCT CGGCGAGATC
TCGAGCCTGC GGGTCGGCCT GCCCACGGGA AGAGTGGCGT ACGCGGTGCT CAGGACAGGC
GGCATGTTCG GCCTCGGAGC GAAGCACTTC GCGATTCCCA TCGAGGCCAT GGTCTACCGG
CCGGGGGACG ATGTCTTCTT GGTGAACATC AGCAAGTACC GGCTCGAGAA CGAACCCGGG
TTCTCGGAGG GCGATTGGCC GAGAGAAGCG AACTGGAGCC TGATCGAGTC GAGACGCCCC
ATGGGTCCCC CGAGCCAGGA AGAGGCCCGG GCGGTGACCC GGACGGAGGC GCCGCCCCGC
GAGGTCGTCA CGACGGAGCG GGTGGAGGTG CGGGAGCGGG CACCCCGGGA AGGGATGGCG
ATACGAGCCG AGGAGGTGGA AGAAGGCAGG GCCCGGACGG CGGTGCCCGT AACGGGGGCT
CCTCCCCGCG AGACCGTCGT CGAGGAGGTG GAAACCCGGC CGGTGACGGA GGCTCATGCC
CCGACGCTTG AGTCCATGAT GAAGGCCGAG GACGTGGAAA AGGGCAGGGT CGAGACCGCG
CCCCGCGAGA CCGTCGTCGA GGAGGTCAGG AGAGAGCCGC CGGCCGCGAT GGAGACCCGG
CCCACGACGA CGGGGCCGGC TCCCGGACAC CTCTCGGCCG CCGGCCTGCA GACCTACCTT
GCGGGGATGA ACTACCCCGC AGGGAGGCAG GATCTCATAA CCCACGCCCG GAAGAAGAGT
GCTCCGGAAA ACGTGCTCAC GACGCTCGGA GGATTTCCCG ACCGGACGTA CCGGTCGGCC
GCAGACGTGA GCGCGGAGTT CGGCGGTGAG GCACGCACCC GGCAGCCGAC CGGGATAGAG
ACGCCGGCCG GGGAAGTTCG GGAGACCGGG ACGGTGACAC CGTCGCTTAC GCACATCTCG
GCTGCCGACC TGCAGGCCTA CCTCAAGGGC ATAGACTACC CGGCGGGAAG GCAGGACCTG
ATCGCCCACG CCCGGAAGAA CGATGCGCCG GAGACCGTGA TCGCGGCGAT CGAGGGCTTC
TCCGACCGGA AATACCATTC GGCCGCCGAC GTGAGCACGG AGTTCGGGAA GGTCAGATAA
 
Protein sequence
MAETILEQQV RRTEGPEFFS SEDVVGKRVK NPEGYDLGEI SSLRVGLPTG RVAYAVLRTG 
GMFGLGAKHF AIPIEAMVYR PGDDVFLVNI SKYRLENEPG FSEGDWPREA NWSLIESRRP
MGPPSQEEAR AVTRTEAPPR EVVTTERVEV RERAPREGMA IRAEEVEEGR ARTAVPVTGA
PPRETVVEEV ETRPVTEAHA PTLESMMKAE DVEKGRVETA PRETVVEEVR REPPAAMETR
PTTTGPAPGH LSAAGLQTYL AGMNYPAGRQ DLITHARKKS APENVLTTLG GFPDRTYRSA
ADVSAEFGGE ARTRQPTGIE TPAGEVRETG TVTPSLTHIS AADLQAYLKG IDYPAGRQDL
IAHARKNDAP ETVIAAIEGF SDRKYHSAAD VSTEFGKVR