Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0389 |
Symbol | |
ID | 4846490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 369211 |
End bp | 370410 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640115063 |
Product | PRC-barrel domain-containing protein |
Protein accession | YP_001046304 |
Protein GI | 126178339 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAAA CGATTCTGGA GCAGCAGGTG CGGAGGACGG AGGGGCCGGA GTTCTTCTCA TCCGAAGATG TCGTAGGAAA GCGGGTGAAG AACCCGGAAG GTTACGATCT CGGCGAGATC TCGAGCCTGC GGGTCGGCCT GCCCACGGGA AGAGTGGCGT ACGCGGTGCT CAGGACAGGC GGCATGTTCG GCCTCGGAGC GAAGCACTTC GCGATTCCCA TCGAGGCCAT GGTCTACCGG CCGGGGGACG ATGTCTTCTT GGTGAACATC AGCAAGTACC GGCTCGAGAA CGAACCCGGG TTCTCGGAGG GCGATTGGCC GAGAGAAGCG AACTGGAGCC TGATCGAGTC GAGACGCCCC ATGGGTCCCC CGAGCCAGGA AGAGGCCCGG GCGGTGACCC GGACGGAGGC GCCGCCCCGC GAGGTCGTCA CGACGGAGCG GGTGGAGGTG CGGGAGCGGG CACCCCGGGA AGGGATGGCG ATACGAGCCG AGGAGGTGGA AGAAGGCAGG GCCCGGACGG CGGTGCCCGT AACGGGGGCT CCTCCCCGCG AGACCGTCGT CGAGGAGGTG GAAACCCGGC CGGTGACGGA GGCTCATGCC CCGACGCTTG AGTCCATGAT GAAGGCCGAG GACGTGGAAA AGGGCAGGGT CGAGACCGCG CCCCGCGAGA CCGTCGTCGA GGAGGTCAGG AGAGAGCCGC CGGCCGCGAT GGAGACCCGG CCCACGACGA CGGGGCCGGC TCCCGGACAC CTCTCGGCCG CCGGCCTGCA GACCTACCTT GCGGGGATGA ACTACCCCGC AGGGAGGCAG GATCTCATAA CCCACGCCCG GAAGAAGAGT GCTCCGGAAA ACGTGCTCAC GACGCTCGGA GGATTTCCCG ACCGGACGTA CCGGTCGGCC GCAGACGTGA GCGCGGAGTT CGGCGGTGAG GCACGCACCC GGCAGCCGAC CGGGATAGAG ACGCCGGCCG GGGAAGTTCG GGAGACCGGG ACGGTGACAC CGTCGCTTAC GCACATCTCG GCTGCCGACC TGCAGGCCTA CCTCAAGGGC ATAGACTACC CGGCGGGAAG GCAGGACCTG ATCGCCCACG CCCGGAAGAA CGATGCGCCG GAGACCGTGA TCGCGGCGAT CGAGGGCTTC TCCGACCGGA AATACCATTC GGCCGCCGAC GTGAGCACGG AGTTCGGGAA GGTCAGATAA
|
Protein sequence | MAETILEQQV RRTEGPEFFS SEDVVGKRVK NPEGYDLGEI SSLRVGLPTG RVAYAVLRTG GMFGLGAKHF AIPIEAMVYR PGDDVFLVNI SKYRLENEPG FSEGDWPREA NWSLIESRRP MGPPSQEEAR AVTRTEAPPR EVVTTERVEV RERAPREGMA IRAEEVEEGR ARTAVPVTGA PPRETVVEEV ETRPVTEAHA PTLESMMKAE DVEKGRVETA PRETVVEEVR REPPAAMETR PTTTGPAPGH LSAAGLQTYL AGMNYPAGRQ DLITHARKKS APENVLTTLG GFPDRTYRSA ADVSAEFGGE ARTRQPTGIE TPAGEVRETG TVTPSLTHIS AADLQAYLKG IDYPAGRQDL IAHARKNDAP ETVIAAIEGF SDRKYHSAAD VSTEFGKVR
|
| |