| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0384 |
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| Symbol | |
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| ID | 4846469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 363254 |
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| End bp | 364093 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115058 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001046299 |
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| Protein GI | 126178334 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.890218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCG TGAGCATTAC AGAGAGACTC TTCGGCAGGA GCGAACCCGA AGGCCGGGAA
GGCGCCTGCA CCGATTCCAC AGTGAGCAGA AAAGCCGTCT CCCTTGCGCA GCAAGGGCGG
TTTCCCGAGG CAATCGATTG TTTCGACCGG GTACTCGAAT CCGACCCGGC AAACGTGAAG
ATGTGGAACA ACAAAGGGGT CTTTCTCGAT CTCCTCGGTA GGGACCAGGA TGCACTGGAC
TGCTGGGAGA AGGCGCTCTC GATCGATCCC GAGTTTGCTC CCGCCTGGGT CTCCCGGGGG
ATGCTGCACC GGCGCCGCAA CCGGCTCGAG GAGGCGCTCG CCTGCTACGA CCGGGCGGTG
GAACTCAACC CGGACTCTGC GGTCGCCTGG TACAACCGGA GCGGCGTTTT CGTCGCGATG
CACCGGATGG ATGATGCGGT CGCCTGCTAC GAGCGCGTTC TCGCGATCGA TCCCCACTTC
GTGGCGGCCT GGACGGATCT CGGCTACGCT CACTTCCTCG GGCACCGGCA CGAGGAGGCA
ATCGCCTGTT ACGACCGTGC CGTCGCCGAC GATCCCGGAA GCGTTCGGGT CTGGAGCCTA
AAGGGCGGCG CCCTGTACGC GCTCGGGGAG TACCGGAAAG CGCTCGAGTG CTTCGATAAG
GTGCTCTCGA TCGACCCGAA GTACGCCGCC GGGTGGAGCA TGAAGTGCAG CGTCCTCTAC
CACCTCGGGA TGTACCGGCA CGCGCTTGCG TGCGCCGATA AAGCGCTCGA GATAAATCCC
ACCTGCGAGC TGACCGGACA GGTCAGAAAG ATGCTTCTCT CTCTTATCCA GAAGTGGTGA
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| Protein sequence | MSGVSITERL FGRSEPEGRE GACTDSTVSR KAVSLAQQGR FPEAIDCFDR VLESDPANVK
MWNNKGVFLD LLGRDQDALD CWEKALSIDP EFAPAWVSRG MLHRRRNRLE EALACYDRAV
ELNPDSAVAW YNRSGVFVAM HRMDDAVACY ERVLAIDPHF VAAWTDLGYA HFLGHRHEEA
IACYDRAVAD DPGSVRVWSL KGGALYALGE YRKALECFDK VLSIDPKYAA GWSMKCSVLY
HLGMYRHALA CADKALEINP TCELTGQVRK MLLSLIQKW
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