| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0381 |
|---|
| Symbol | |
|---|
| ID | 4847246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 361264 |
|---|
| End bp | 362094 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640115055 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046296 |
|---|
| Protein GI | 126178331 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.824542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TCTGGACGGT GCTCCTCGCC GCCGTCATTC TCCTCCTCTT CGCGGTGCCG
GTCGTCCAGC AGCAGGTGAC CCGGGCCCGC CGCCTGCGGG CGATCCAGGA TCTCGAAGCC
GGGCGCCGGA CCCGGGTCGT CGCCCTCATC CACCGGCAGG AGCGGATCGG CTTTCTGGGC
ATCCCGCTCT TTCGCTACAT CGACATCAAC GACTCCGAAG AGGTCCTCCG GGCGATCCGG
CTCACCGCCC CGGAGATGCC GATCGACCTC ATCCTTCACA CCCCCGGCGG CCTGATCCTC
TCGTCGGAGC AGATCGCGAT GGCGCTCCGG CGGCATAAGG GGAAGGTGAC GGTCTTCGTC
CCGCACTACG CCATGTCGGG CGGGACGCTC ATCTGCCTTG CGGCGGACGA GGTGGTGATG
GACGAGAACG CCGTGCTCGG CCCGGTCGAC CCCCGGATCG GGGAGTACCC GGCGGCTTCG
CTCCTGCGTG TCCCGCGCCT GAAGCCCCCG GAGGAGATCG ATGACGAGAC GTTCGTCCTG
GTCGACATCG CGGCGAAGGC CCAGACCCAG ATGCGGGAGT TCGTGGCCGA TCTCCTCCGG
GAACGGATGG ACGCCGGGCG TGCGGACAGC CTCGCGCGCC TGCTCTCCGG AGGAACGTGG
ACGCACGACT ACCCGATCAC CTTCGAGCAG GCCCGGGAAC TCGGGCTCCC CGTCACTTCA
GGCATGCCCG CCGGGATCTA CCGGCTGATG GACCTCTTTC CCCAGGCGAT GCCCCGCCGC
CCGTCGGTAG CCTACGTCCC GATCCCCTAC CGGGAGGAGA AGAAAAGATG A
|
|---|
| Protein sequence | MPDLWTVLLA AVILLLFAVP VVQQQVTRAR RLRAIQDLEA GRRTRVVALI HRQERIGFLG
IPLFRYIDIN DSEEVLRAIR LTAPEMPIDL ILHTPGGLIL SSEQIAMALR RHKGKVTVFV
PHYAMSGGTL ICLAADEVVM DENAVLGPVD PRIGEYPAAS LLRVPRLKPP EEIDDETFVL
VDIAAKAQTQ MREFVADLLR ERMDAGRADS LARLLSGGTW THDYPITFEQ ARELGLPVTS
GMPAGIYRLM DLFPQAMPRR PSVAYVPIPY REEKKR
|
|---|
| |