| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0376 |
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| Symbol | |
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| ID | 4847070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 356234 |
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| End bp | 356713 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115050 |
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| Product | methyl-coenzyme M reductase, protein D |
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| Protein accession | YP_001046291 |
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| Protein GI | 126178326 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4055] Methyl coenzyme M reductase, subunit D |
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| TIGRFAM ID | [TIGR03260] methyl-coenzyme M reductase operon protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.259106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACG CCGCATTTCC GCAACTCAGG ATTGTGCCCG TACGGATGCT CAAGCCTGAG
ACAGCAGAAC GCCTGCTCAA TATGCTTGCC TGCGTCGCCG GCATCCGCCG AATGATGATT
CACGGGCCCG GCCTGCCGAA GGTTGTCCCT TACGGGCCGG CACGGGGGAG CCCGAACCCT
CACTCCGACC GCAGAGCGAT CCGCGTCGCC GACGCCGAGA TTGCGCTGCG CGTCCAGGTG
GGCATGGTCA TCCTGGAGGT CGAGGACGCT TCCGTCATCG AGGAGGTTCG GTCGCTCTGC
GACGGCTTCT TTGTGGAGTT CCCCTACCTG CTCCAGGAAG GCAGGTTCAT GAAGACCGCC
CCGACGCTCG TGGACTACGC GAAATATGGG CCGGACGCCG ATACATCGCT CGTCGGTCTC
ACGGATCCCC GGAATGGGGA GAAACCGGTG GTTATCCGGA CGGAACAGTG TGGCGCATAA
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| Protein sequence | MTNAAFPQLR IVPVRMLKPE TAERLLNMLA CVAGIRRMMI HGPGLPKVVP YGPARGSPNP
HSDRRAIRVA DAEIALRVQV GMVILEVEDA SVIEEVRSLC DGFFVEFPYL LQEGRFMKTA
PTLVDYAKYG PDADTSLVGL TDPRNGEKPV VIRTEQCGA
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