Gene Memar_0342 details

Gene Information

• Locus tag: Memar_0342
• ID: 4847897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 321209
• End bp: 321877
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640115016
• Product: phosphoribosyltransferase
• Protein accession: YP_001046257
• Protein GI: 126178292
• COG category: [R] General function prediction only
• COG ID: [COG1926] Predicted phosphoribosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGACA GGTTGAGCGT TTTTGAGAAC CGGACCGATG CCGGGAGGCA ACTCGCGGCG 
CCCCTCTCGT CGCTCGAGAT GGCTGCCGAG CCGGTGATCT GCGCCATTCC TGCCGGGGGA 
GTGCCGCCGG GGCTTGAGGT GGCGCGGGCC TTGAAGGCCC CGCTCCGGAT GGCGGTGGTG 
CGGAAGGTAC AGGTTCCCTG GGACCCGGAG GCCGGGTTCG GGGCCGTGAC CTGGAACGGG 
CGAGTCTTTT TGAATCAGCC CCTCATGAGC GCTCTCGACC TCTCGGAAAC CGAAGTGAAC 
GCCGCCGTCG CGAAAGCTAA AAAGAACGTG GAAGAACGAA TAGAAAAGTT CGCCGGCGGC 
CGGGAGGAGC CGGGGATCAG GGACCAGACC GCGATCCTGA TCGACGACGG CCTCGCAACC 
GGGTATACGA TGTTCGCCGC AATCGAGGCT GCCCGCGCCG GCTCCCCCCG CGAGATCATC 
GTGGCGGTTC CCACCGGATC GCTCCACGCC GTCAACTTCA TAGCCCGGAA GGTGGATCTC 
GTCGTCTGCT TAAACGTCAG AACCAGCCCC ACCTTTGCGG TGGCGCAGGC ATACGAGCGG 
TGGCACGATA TCACCGACCA GGAGGTGCAG GAACTGCTGA TCCAGGCCCG GGACATGGGG 
CTCTTCTGA 

 

Protein sequence

MRDRLSVFEN RTDAGRQLAA PLSSLEMAAE PVICAIPAGG VPPGLEVARA LKAPLRMAVV 
RKVQVPWDPE AGFGAVTWNG RVFLNQPLMS ALDLSETEVN AAVAKAKKNV EERIEKFAGG 
REEPGIRDQT AILIDDGLAT GYTMFAAIEA ARAGSPREII VAVPTGSLHA VNFIARKVDL 
VVCLNVRTSP TFAVAQAYER WHDITDQEVQ ELLIQARDMG LF