| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0315 |
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| Symbol | |
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| ID | 4848175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 295838 |
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| End bp | 297010 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640114989 |
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| Product | DNA-directed RNA polymerase, subunit A'' |
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| Protein accession | YP_001046230 |
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| Protein GI | 126178265 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.376745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCG ATATGGAGCA GCGGATCGAT TCCCTCGATC TGCCTTACCG GACGCGGGAA
GACCTCAAAG CGAGTCTTGC GGATCGGGAC GTCACCGAGG AAGAGTTCGA GCAGATTCTC
GAGATGGTCT TTTCGGAGTA TCAGAAGAGC CGGATCGAGC CCTGCGAGGC GGTCGGTGTC
GTGGCGGCGC AGTCGATCGG CGAGCCCGGC ACCCAGATGA CGATGCGTAC GTTCCACTAC
GCGGGTGTGG CCGAGATCAA CGTTACCCTC GGTCTCCCCC GCCTGATCGA GATCATGGAC
GCCCGGCGCG AGCCGAGCAC CCCCACGATG GCGGTCCACC TGCTGGACGA CTGGGCGTTC
AACCGCGACC GCGCCCGCGA GGTGAGCTGG CAGATCGAGG CCGCGCCGCT CCACGAGTTC
GGGGATATCA CCATCGACAT GGAGAACATG CAGGTCCTCG TCATGTTGAA CAAGGCGGTC
TGCGACCGGC GCAAGATCTC GATCGACGAG ATCCTCGAGG CGGGGCCGAG GAAGATGCGT
GAAAAGCGGC ACTTCCGCGA CTTCGATGTC GAGGGGGACC CGAAGAGGGC CTCGATCACG
TTCACTCCGA AGAACCGGGA GAGCTACCAG AACCTCTTCC AGCTCGCGGA ACACGTCCGG
CACGTCATCG TCCAGGGTAT CGACGATATC GAGCGGGTCG TCGTCAGAAA GGAAGGCGGA
GAGTATATCC TTTATACTGA GGGCTCCAAC CTAAAAGATG TCTTCGAAGT CGAAGGAGTC
GATACCTCCC GCACCCGGAG CAACAACATC AGCGAGATCG CCGATGTGCT CGGTATCGAG
GCCGGCCGGA ATGCAATCAT CCAGGAGGCC TTAAGCACCC TGAACGAACA GGGTATCGGC
GTCGATGTCC GTCATATCAT GCTCGTCGCG GATATGATGT GCATGGAGGG CGAGGTCAAG
CAGATCGGCC GGCACGGTAT TGCCGGCGAG AAGGAGAGTG TCCTTTCCCG GGCTGCATTC
GAAGTAACGG TCAACCATCT GCTGGATGCT GCAATCGCGA ACGAGGTGGA CGAATTAAAC
GGCGTCACCG AGAACGTGAT CGTGGGCCAG CCAATCCAGC TTGGCACCGG TGATGTGAAA
CTCATCGCAA AACCCATAAA CTTGAAAATC TAG
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| Protein sequence | MNSDMEQRID SLDLPYRTRE DLKASLADRD VTEEEFEQIL EMVFSEYQKS RIEPCEAVGV
VAAQSIGEPG TQMTMRTFHY AGVAEINVTL GLPRLIEIMD ARREPSTPTM AVHLLDDWAF
NRDRAREVSW QIEAAPLHEF GDITIDMENM QVLVMLNKAV CDRRKISIDE ILEAGPRKMR
EKRHFRDFDV EGDPKRASIT FTPKNRESYQ NLFQLAEHVR HVIVQGIDDI ERVVVRKEGG
EYILYTEGSN LKDVFEVEGV DTSRTRSNNI SEIADVLGIE AGRNAIIQEA LSTLNEQGIG
VDVRHIMLVA DMMCMEGEVK QIGRHGIAGE KESVLSRAAF EVTVNHLLDA AIANEVDELN
GVTENVIVGQ PIQLGTGDVK LIAKPINLKI
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