Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0306 |
Symbol | |
ID | 4848198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 284983 |
End bp | 286953 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640114980 |
Product | anaerobic ribonucleoside-triphosphate reductase |
Protein accession | YP_001046222 |
Protein GI | 126178257 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.674965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGCC TCCAGTCGCT CTCCGGCCCC CTCATCCGCG AGATCGTCAA CATGACGCTC CTCGAGCGCG GCCTCGTCCC CTACCGCAAC GTCTGCACCC GGGTGGGAAC CCCGGTCTTC GACGCGCACC TCATCGATGT GGGACGGGGA TTCGAGGCGC ACGACAACGC CAACCTCCAG GAGAACGCCG AGACATCCCA CAAGAAGAAG GCGGACAAGA TCAGCAAGGA GCAGTACCTC CTGCAGCTCC CCCCGGACCT TGCGGACCAC CACCTCCGCG GCGATCTCCA CATCCACGAC CTGGAGTACT TCGGGACCCG CCCGTTTTGC CAGGATTGGG ACCTGCGCTA CTTCCTCTAC TACGGCCTGA TGCCTGATGG GAACGGGACG AAGGCCTCGG TCGCCGGCCC CGCGAAGAGG GCCGAGGTGG CGGTCCTCCA CGCGGTCAAG GCGCTCGGCT CCGCCCAGAC GAACTTCGCC GGCGGCCAGG GCTACTACAA CTTCCTCACG TTCATGGCGC CCTTCTTCGA GGGGATGGAC TACGAGGAGA TCAAGCAGCT GATGCAGATG TTCGTCTACG AGATGACCCA GATGATGGTC GCCCGCGGCG GCCAGGTGGT CTTCTCGTCG GTCCAGCTCT CCCCGGGCGT CCCCACCCTC TGGAAGGACA AGCCCTGCGT CTACCGCGGC AAGGTCTGGA ACGGAGAACA GGCACCGCTC CGGACCTACA ACGAGTTCGA ACGGGAGGTC CGGCTCCTCT TCAAGGCGCT GATGGAGGTG ATGCTCGAGG GGGACTACTG GGGCAAGCCC TTCTCCTTCC CGAAACCCGA GATCAGCATC GAGCCCGACT TCCTTAACGA GGACGAGGAG TTCAACCGCG AGCACCCCGA CCTCCCGACC TACCAGGACC TCTACCTGAT GACGTTCGAA CTCGCGTCCA AATACGGCAC CCCCTACTAC GACAATCAGA TCCCTCCCTA CCGGGGCGCC GGCGAGGGGA TCTCGTGCTA TCAATGCTGT GCCTACCAGT TCTCCTCCCT CGCCGACGAG GACGACGAGT TCGAGGACAA ACTCTACTTC CGGGAAGGGA AGCACTTCTC GATGGGGTCA TGGATGGTGA TGTCCATCAA CTGCCCACGG GCGGCGTACA AGGCGGAGGG CGACCAGGAA CGGCTCTTTG CCGAACTGAA GGCGCTCATG GATACCGCCG TCGAACTCTT CCGGATCAAG CGCCGCTGGA TGTCTCACAT CCGGACAAAC GGCCGGATGC CGTTTGCGAT GCAGCGCCCG AAGGACCCGA ACACCGGCGA ACGCGGCGCG GTTGCCGTGG ATCTCGAGGG GCTCGTCTAC ACCATCGGCG TGGTCGGCGT CAACGAGATG GTGCAGCACT TCACCGGTCA CCAGCTCCAT GAGTCGCGCG ACGCGTTCCG TCTCGCCGTC CGGGCAATGA CCGAACTCGA GATGTACGCC CGTGAACTCT CGCAGAAGCA CAACATGACG ATCGCCCTCG CCCGCACCCC GGCAGAGACA ACCGGGCAGC GGTTTGCCGT CGCGGACCTC CTCGACGAGC GGTTCCGCGA CCACGCCATC CGGGTCGTCA AGGGCGACGC CGATGCGGCG CTCGATACGC TCGGCACGAC GCTCGACCTC CCCATCTACT ACACCAACGG GACGCATATC GCCCCGGGAG CCCCCGTTCC GCTCACGAAA CGGATCGAGA TCGAGCACAT CTTCTTCCCC ATCGTGGACG GCGGAAACAT CTTCCACGTA TGGCTCGGGG AGGCGCGCCC CGACCCCCGC GGACTGATGG AGATGGCGAT GAACCTCTGC CGGACGACGC AGATCGGCTA CTTCGCCTTC ACCCGGGATC TCACGGTTTC CCTGAAGGAG TACCGGGAAC TAAAACCGGC GCGCCCCGAC ACGGGGAAGA CGGCCGGCAC CTCTCCGGCG GCAGACCGGG CAGGTGCCTG A
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Protein sequence | MLGLQSLSGP LIREIVNMTL LERGLVPYRN VCTRVGTPVF DAHLIDVGRG FEAHDNANLQ ENAETSHKKK ADKISKEQYL LQLPPDLADH HLRGDLHIHD LEYFGTRPFC QDWDLRYFLY YGLMPDGNGT KASVAGPAKR AEVAVLHAVK ALGSAQTNFA GGQGYYNFLT FMAPFFEGMD YEEIKQLMQM FVYEMTQMMV ARGGQVVFSS VQLSPGVPTL WKDKPCVYRG KVWNGEQAPL RTYNEFEREV RLLFKALMEV MLEGDYWGKP FSFPKPEISI EPDFLNEDEE FNREHPDLPT YQDLYLMTFE LASKYGTPYY DNQIPPYRGA GEGISCYQCC AYQFSSLADE DDEFEDKLYF REGKHFSMGS WMVMSINCPR AAYKAEGDQE RLFAELKALM DTAVELFRIK RRWMSHIRTN GRMPFAMQRP KDPNTGERGA VAVDLEGLVY TIGVVGVNEM VQHFTGHQLH ESRDAFRLAV RAMTELEMYA RELSQKHNMT IALARTPAET TGQRFAVADL LDERFRDHAI RVVKGDADAA LDTLGTTLDL PIYYTNGTHI APGAPVPLTK RIEIEHIFFP IVDGGNIFHV WLGEARPDPR GLMEMAMNLC RTTQIGYFAF TRDLTVSLKE YRELKPARPD TGKTAGTSPA ADRAGA
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