Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0301 |
Symbol | |
ID | 4846330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 280118 |
End bp | 281290 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640114975 |
Product | DNA-directed RNA polymerase, subunit A'' |
Protein accession | YP_001046217 |
Protein GI | 126178252 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.246766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCG ATATGGAGCA GCGGATCGAT TCCCTCGATC TGCCTTACCG GACGCGGGAA GACCTCAAAG CGAGTCTTGC GGATCGGGAC GTCACCGAGG AAGAGTTCGA GCAGATTCTC GAGATGGTCT TTTCGGAGTA TCAGAAGAGC CGGATCGAGC CCTGCGAGGC GGTCGGTGTC GTGGCGGCGC AGTCGATCGG CGAGCCCGGC ACCCAGATGA CGATGCGTAC GTTCCACTAC GCGGGTGTGG CCGAGATCAA CGTTACCCTC GGTCTCCCCC GCCTGATCGA GATCATGGAC GCCCGGCGCG AGCCGAGCAC CCCCACGATG GCGGTCCACC TGCTGGACGA CTGGGCGTTC AACCGCGACC GCGCCCGCGA GGTGAGCTGG CAGATCGAGG CCGCGCCGCT CCACGAGTTC GGGGATATCA CCATCGACAT GGAGAACATG CAGGTCCTCG TCATGTTGAA CAAGGCGGTC TGCGACCGGC GCAAGATCTC GATCGACGAG ATCCTCGAGG CGGGGCCGAG GAAGATGCGT GAAAAGCGGC ACTTCCGCGA CTTCGATGTC GAGGGGGACC CGAAGAGGGC CTCGATCACG TTCACTCCGA AGAACCGGGA GAGCTACCAG AACCTCTTCC AGCTCGCGGA ACACGTCCGG CACGTCATCG TCCAGGGTAT CGACGATATC GAGCGGGTCG TCGTCAGAAA GGAAGGCGGA GAGTATATCC TTTATACTGA GGGCTCCAAC CTAAAAGATG TCTTCGAAGT CGAAGGAGTC GATACCTCCC GCACCCGGAG CAACAACATC AGCGAGATCG CCGATGTGCT CGGTATCGAG GCCGGCCGGA ATGCAATCAT CCAGGAGGCC TTAAGCACCC TGAACGAACA GGGTATCGGC GTCGATGTCC GTCATATCAT GCTCGTCGCG GATATGATGT GCATGGAGGG CGAGGTCAAG CAGATCGGCC GGCACGGTAT TGCCGGCGAG AAGGAGAGTG TCCTTTCCCG GGCTGCATTC GAAGTAACGG TCAACCATCT GCTGGATGCT GCAATCGCGA ACGAGGTGGA CGAATTAAAC GGCGTCACCG AGAACGTGAT CGTGGGCCAG CCAATCCAGC TTGGCACCGG TGATGTGAAA CTCATCGCAA AACCCATAAA CTTGAAAATC TAG
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Protein sequence | MNSDMEQRID SLDLPYRTRE DLKASLADRD VTEEEFEQIL EMVFSEYQKS RIEPCEAVGV VAAQSIGEPG TQMTMRTFHY AGVAEINVTL GLPRLIEIMD ARREPSTPTM AVHLLDDWAF NRDRAREVSW QIEAAPLHEF GDITIDMENM QVLVMLNKAV CDRRKISIDE ILEAGPRKMR EKRHFRDFDV EGDPKRASIT FTPKNRESYQ NLFQLAEHVR HVIVQGIDDI ERVVVRKEGG EYILYTEGSN LKDVFEVEGV DTSRTRSNNI SEIADVLGIE AGRNAIIQEA LSTLNEQGIG VDVRHIMLVA DMMCMEGEVK QIGRHGIAGE KESVLSRAAF EVTVNHLLDA AIANEVDELN GVTENVIVGQ PIQLGTGDVK LIAKPINLKI
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