| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0298 |
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| Symbol | |
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| ID | 4848312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 274099 |
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| End bp | 275640 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640114972 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_001046214 |
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| Protein GI | 126178249 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.992089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGAGAG CATATTTTGC GCGGGAGCAC GTAGCGCGCC ACCAGTTAGA CTCTTATAAC
AATTTCCTCC TGCACAACCT TCAGAAAGTC GTCGACGAGC AGCGCGTCAT CGAGACCGAT
ATCGAGACTC GGGGGAAAGG AAAGGAGGCT GTATGGGTTG AACTGGGCAA GGTCGAGGTG
AAAAAACCTC TTGTCCGTGA AGCGGACGGA TCGCAGTCCG AACTCTTCCC GAGCGAGGCG
CGCCTGAGAA ACCTCACCTA TGCGGCGCCC ATTCAACTCG AGATGACGCT TGTCCAGGGC
GAAGAAGCGC AGGACCCGAT CGTCACCACT ATCGGGCAGT TGCCGGTGAT GGTGGGGTCG
GCCGCCTGCA ACCTCTACAA CATGAGCGAC CCCGAGCGGA TCGAGCACGG CGAAGATCCC
CTCGATCCAG GCGGCTACTT CGTCGTCAAC GGCACGGAAC GGGTGCTGAT GACGCTCGAG
GATCTCGCCT CGAACAAGAT CATGACCGAG TTCACCGAGC GATACAACGA GCGGATCTAC
GTGGCGAAGG TCTTCTCGCA GTACCGGGGC TACCGCGCGC TCGTGATCGT CGAGAGGAAC
AGGAAGAACC TGCTCGAGGT CTCGTTCCCT TCGGTCGCCG GGCACCTCCG CTTCATCGAC
CTGATGCGGG CGCTGGGGCT GCAGGGCGAC CACGACATCG TGGAGGCGGT TTCGACCGAC
GAGGAGATCC TCACCTTCAT GATGCAGAAC CTTGAAGAGG GCGAGTGCGA CACCGTCGAC
GAAGGCGTCA TGTACGTCGG GAAAAAACTC GCACCCAACC AGACCCGGGA CTACCAGCGG
AAACGTGCGG AGTTCGTTCT GGACAACTAC CTCCTCCCGC ACTTAAACTA CCTGATGCCG
GTGGGCCTGA AGGAGGAAGA CCCCGGATAC CGGACGGCAG TCGAGGGCGT CCGCCTCGCA
AAGGCGCACT TCCTCGGCCG CATGGCCGAG GCCTGTTTCG ACCTGGTGCT CGATCGGCGC
CGGATCGACG ACAAGGACCA CTACTCGAAC AAGCGGCTGA AACTTGCCGG CGACCTGATG
GAAGACCTCT TCCGGATCTC ACTCAACCGC TTAACGAGGG ACGTGAAGTA CCAGCTCGAG
CGGGCCAGCA TGCGCCACCG CGACCTCTCG ATCGGGACCG CCGTGCGCGC GGACGTCCTG
ACCGAGCGGC TGCTGCACCC GCTTGCCACC GGCAACTGGG TGGGCGGGCG CACCGGCGTC
TCGCAGCTCC TCGACCGCGT GGATCACATG GCGGTGCTCT CGCACCTTCG CCGTGTAATC
TCGCCTCTCT CCCGCTCGCA GCCTCACTTC GAGGCCCGTG ACCTGCACCC CACCCAGTGG
GGGCGGATCT GTCCGAGCGA GACGCCTGAG GGACCGAACT GTGGACTGGT GAAGAACTTC
GCCCAGATGG TCGAGATCAG CAAGGGTGTA ATCAACGAAG AGGAAGTGAA GAACATTCTG
TACGATATGG GCGTCATCGC CCTCCGGAGA GAGACGGCAT GA
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| Protein sequence | MSRAYFAREH VARHQLDSYN NFLLHNLQKV VDEQRVIETD IETRGKGKEA VWVELGKVEV
KKPLVREADG SQSELFPSEA RLRNLTYAAP IQLEMTLVQG EEAQDPIVTT IGQLPVMVGS
AACNLYNMSD PERIEHGEDP LDPGGYFVVN GTERVLMTLE DLASNKIMTE FTERYNERIY
VAKVFSQYRG YRALVIVERN RKNLLEVSFP SVAGHLRFID LMRALGLQGD HDIVEAVSTD
EEILTFMMQN LEEGECDTVD EGVMYVGKKL APNQTRDYQR KRAEFVLDNY LLPHLNYLMP
VGLKEEDPGY RTAVEGVRLA KAHFLGRMAE ACFDLVLDRR RIDDKDHYSN KRLKLAGDLM
EDLFRISLNR LTRDVKYQLE RASMRHRDLS IGTAVRADVL TERLLHPLAT GNWVGGRTGV
SQLLDRVDHM AVLSHLRRVI SPLSRSQPHF EARDLHPTQW GRICPSETPE GPNCGLVKNF
AQMVEISKGV INEEEVKNIL YDMGVIALRR ETA
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