Gene Memar_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0256 
Symbol 
ID4846830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp235333 
End bp236382 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID640114927 
ProductABC transporter-related protein 
Protein accessionYP_001046172 
Protein GI126178207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGGGA CCGCCGGGCT CACCAAACGC CTCGGGGACT TCACCCTCGA CGACGTGGAT 
CTGACCGTCG CCGACGGCGA GTACTTCGTC ATCCTCGGGC CGACCGGCGC GGGAAAGACC
ATCCTCCTCG AGACCCTGGC GGGGATCTAC TCCCCGGACG CCGGAACGAT CGCCCTTGAT
AACCGCGACA TCACCCGCAC CGACCCAAAA GACCGGGGGA TCGGCATGGT CTACCAGGAC
TACATGCTCT TCCCCCACCT CACCGTCGGG GAGAACATCG GGTTCGGCCT CAAGCAGCGG
AAGGCCGAGC CCGCCCGCAT CAGGGAGAGC GTGCAGGAGA CCGCGGCCCT CCTCGGGATC
GGCCACCTCC TTCACCGGAC GACAGGGACG CTCTCCGGTG GGGAGCAGCA GCGGGCGGCG
ATCGCCCGGG CGCTCGCCCT CCGGCCCCGC GTCCTGCTCC TCGACGAACC GCTCTCGGCG
CTCGACACCG TCACCCGGGA ACGGCTCAGG AGGGAACTGA AGGCGATCCA CCGGACGACC
GGCACGACGG TCATCCACAT CACCCACCAC TTCGAGGACA TATTCGCCCT CGCTGACCGG
GTGGCGGTGA TGCAGGACGG AAGGATCGTC CAGACGGGCA CGCCCGACGA GGTCTTTAGG
AGACCCGCCA CCGAGTTCGT CGCCGCCTTC ACCGGCATGG AGAACGTCTA CTGCGGGGTA
TCCCGCGTCC GGAACGGGGA AGCGACGATC GACCTCGGGG AGATCGTCGT CCGGACGGTC
ACTGCGATCG AGGGGGACGT CTGCGTCGGC ATCCGGCCGG AGGAGGTGAT CCTCTCCCGC
CAACCGTTCG AGTCGAGCGC CGCAAACACC TTTTCGGGCA CGGTTGCTGA GATTCGGCAG
AACGGCATGT TTTCGCGGGT CGTCGTGGAT ACGGGACTGC CCTTCGTCGC CGTCCTGACC
CGGCAGAGCG TCGCCCGCCT GGGCCTCGTC GAGGGGGAGC CGGCAAATGT CACTTTCAAA
GCCTCCGCGG TCCACGTCTT CAAGCGGTAG
 
Protein sequence
MLGTAGLTKR LGDFTLDDVD LTVADGEYFV ILGPTGAGKT ILLETLAGIY SPDAGTIALD 
NRDITRTDPK DRGIGMVYQD YMLFPHLTVG ENIGFGLKQR KAEPARIRES VQETAALLGI
GHLLHRTTGT LSGGEQQRAA IARALALRPR VLLLDEPLSA LDTVTRERLR RELKAIHRTT
GTTVIHITHH FEDIFALADR VAVMQDGRIV QTGTPDEVFR RPATEFVAAF TGMENVYCGV
SRVRNGEATI DLGEIVVRTV TAIEGDVCVG IRPEEVILSR QPFESSAANT FSGTVAEIRQ
NGMFSRVVVD TGLPFVAVLT RQSVARLGLV EGEPANVTFK ASAVHVFKR