| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0220 |
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| Symbol | |
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| ID | 4846042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 199005 |
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| End bp | 200468 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640114890 |
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| Product | succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_001046136 |
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| Protein GI | 126178171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.804076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA TCACCCTCCG GGTCTCGCGT TTCGACCCCG CCGCGGACGC GGAGCCACAC
TTCGAGGAGT ACATCGTCCA GGTCAACGAG GGCGCCCGGG TGCTCCACGC CCTCCACGCC
GTCCGCGACG AGCACGACCC GACCCTCGCC TACCGCTACT GCTGCGGGTC CGGGCAGTGC
GGGAGCTGCG CTGTCCAGGT GGACGGGAAG CCCGTCCTCG CCTGTATGGA GGAGGCCCGT
GACGGGATGA CGGTCGAGCC GCTGGCGCTC CCGGTCTTGA AAGACCTGAT GGTCGACCTG
GAGCCGGTGA TAGCAAAGAT CGCCCGGATC TGCCCTGCGC CGGACGCTGC CCTCCCGGCA
CGGGAGGAGA TCGAGGCGAT CAAGCCGCTC CGGGACTGCA TCGAGTGCCT CTGCTGCGTA
TCGGCCTGCC CGGCGCTCCA GGTGACGGAT TTCGCGGGGC CGACGGTGCT CCGCCAGGAG
ATGCGCCTCG CCCTCGACCC CCGTGACTCG GGTGACCGGA TCACCGACGC GATCGAGAAA
GGGCTCTTCT ACTGCACGAC CTGCAAGCGC TGCACGGAGG TCTGCCCCAA AGAGATCGAC
GTCCCGGGCA AAGCCATCGA AAAACTCCGC GAGATCGCGA ACCGCCGCGG CCTGACCCTC
CCCCGCCACC AGGAGGTGGC GCGGCTGGTG CAGGAAACCG GCCGGAGCGT GGAGCGGACG
CAGCCGACCT TCCTCGAACA GGTGCCGGAG GTGATCGAGC CCGACGGCCC CGTCCGCGGC
GAGGTGGGGT TCTTCGTCGG GTGCATGTTC AACGGCCGGG TGCCGCAGAC GGCACTCGAC
GCGATGGAGG TCATGAAGCG CAACGGCATC CGGGTGATCG TCCCCCACGA CCAGGTCTGC
TGCGGTTCGC CGCTGATCCG GACGGGGCAG ACGTCATTCG TCGACGACCT GAAGCAGAAG
AACATCGAGG CCTTCGCCAG CCGTGGGATA AAGACCGTGA TGACGATCTG CGCCGGATGC
GGGGCGACGC TGAAGAACGA TTACGAGACG CCGTTCGAGG TGAAAGACGT CACCGAGATC
CTCACGGAGT ACGGGATCGA GCTCCCGTCG AAACTCGACG TCAGGGCGAC CTACCACGAT
CCCTGCCACC TCCTCCGCGG CCAGGGGATC AGCGAGCAGC CGCGGACACT CCTGCGCCTG
GGGGTCCGGG AGTTCGTGGA GATGCCGACG CAGTGCTGCG GGGCCGGCGG CGGCGTCCGC
TCAGGGGTGC CGGAAGAGGC AAAAGCCCTC GGGGCGAAAC GCGACGAGTG CGTGAAGGGA
ACCGGCGCGG ACGTCGTGGT GACGGTCTGC CCGTTCTGCG AGTTCCATAT CGCCGACTGC
ACGGACGTGC CCGTCAAGAA CCTGACGACG ATCCTGCTCG AAGGGTACCG GAAGAAGGAC
GCGGAGCGGA AAGGATCTTC ATAA
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| Protein sequence | MKTITLRVSR FDPAADAEPH FEEYIVQVNE GARVLHALHA VRDEHDPTLA YRYCCGSGQC
GSCAVQVDGK PVLACMEEAR DGMTVEPLAL PVLKDLMVDL EPVIAKIARI CPAPDAALPA
REEIEAIKPL RDCIECLCCV SACPALQVTD FAGPTVLRQE MRLALDPRDS GDRITDAIEK
GLFYCTTCKR CTEVCPKEID VPGKAIEKLR EIANRRGLTL PRHQEVARLV QETGRSVERT
QPTFLEQVPE VIEPDGPVRG EVGFFVGCMF NGRVPQTALD AMEVMKRNGI RVIVPHDQVC
CGSPLIRTGQ TSFVDDLKQK NIEAFASRGI KTVMTICAGC GATLKNDYET PFEVKDVTEI
LTEYGIELPS KLDVRATYHD PCHLLRGQGI SEQPRTLLRL GVREFVEMPT QCCGAGGGVR
SGVPEEAKAL GAKRDECVKG TGADVVVTVC PFCEFHIADC TDVPVKNLTT ILLEGYRKKD
AERKGSS
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