| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0204 |
|---|
| Symbol | |
|---|
| ID | 4846178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 187054 |
|---|
| End bp | 188055 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640114874 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001046120 |
|---|
| Protein GI | 126178155 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTATCTG CGGGAGAACG GGCACGCCGA ACCGGATCAT ACCGTCGTTA CCGGGAGGGA
CAGAACATTC GGATATTAGT CACCGGCGGG GCCGGGTTCA TCGGCTCCCA CATCATCGAG
CGGCTGCTCG ACGACGGCCA CGAGGTCGTC TGCCTGGACA ACTTCGACCC CTACTACGAC
CCCGAGATCA AAAAAAGCAA TATCCAGCCT TTCTTGGAGA ACAAAAACTT CACCCTCGAA
GTCGGCGACA TCCGGAACAG GGATACCCTC ACCCGGCTCC TCGAAGGCAC AGACTACGTC
TTTCACGAGG CGGCGCAGGC AGGCGTCCGC ATCTCGGTTG AAGACCCCAT AAAACCCCAT
GAGGTGAACG CTACCGGGAC ACTCAATCTG CTGGAAGCAT CCCGGGACTC CGGCGTGAAA
AAGATCATCA ACGCCTCCTC CTCGTCGGTC TACGGGACCG TGGAGTACCT CCCCTTCGAC
GAAGACCACC CCCGGCGGCC GGTCTCCCCC TACGGCGTCT CGAAACTCGC GGCCGAGGAG
TACTGCCGGG TCTTTTCGGA ACTCTACGGG TTAAAGTCGG TGTCTTTGCG GTACTTCACC
GTCTACGGCC CGAGGATGCG GCCGGATCTC GCGATCAGCA TCTTCACCCG AAAAGCCCTC
GCAAACGAGC CGATCACGAT CTTCGGCGAC GGAACGAAGA CCAGGGACTT CACCAACATC
AAGGACATCG TCCGGGCAAA CCTCATCGCC ATGCAGAAGG GTGAGGGGGC CTACAACATT
GGTGGAGGGC ACCGGGTCTC CATCCAGACA CTTGCCGAGA CGATCATCGA GACCACCGGG
AGTTCATCCG AGATCAGGTA TGCGGATACG GTAAAAGGCG ATGCCGAGCA CACCTTCGCC
GACACGAAGA AGGCGGAGCG GAATCTCGGC TGGCGCCCGC AGGTATCGCT TGAAGAAGGA
TTACGGAGGT ATGCAGCATG GGTGTCGAAC TCTCGGTCGT GA
|
|---|
| Protein sequence | MVSAGERARR TGSYRRYREG QNIRILVTGG AGFIGSHIIE RLLDDGHEVV CLDNFDPYYD
PEIKKSNIQP FLENKNFTLE VGDIRNRDTL TRLLEGTDYV FHEAAQAGVR ISVEDPIKPH
EVNATGTLNL LEASRDSGVK KIINASSSSV YGTVEYLPFD EDHPRRPVSP YGVSKLAAEE
YCRVFSELYG LKSVSLRYFT VYGPRMRPDL AISIFTRKAL ANEPITIFGD GTKTRDFTNI
KDIVRANLIA MQKGEGAYNI GGGHRVSIQT LAETIIETTG SSSEIRYADT VKGDAEHTFA
DTKKAERNLG WRPQVSLEEG LRRYAAWVSN SRS
|
|---|
| |