Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0194 |
Symbol | |
ID | 4848054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 178538 |
End bp | 179350 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640114864 |
Product | hypothetical protein |
Protein accession | YP_001046110 |
Protein GI | 126178145 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.604489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGATC AAAGTGTTGC TCAAATTCGT AACTACGTCC TCAACCAATA TGTGAAGTCC ACCCCAAGGC CTCAGAATGC CATTGACATT TTCAAGGGGG AGTGGACTTC AAAACTTCCT ACGCCATATG AAGATTTGGA AGTAGGATCT ACCCAGCTTT TTGAAGATCC TCGCATCTCA TGGGCCGTGG AGCAATTTGG GGGCGTAAAC AATAAATCAA TATTGGAGCT TGGCCCACTG GAAGGCGGAC ACACATATAT GCTCGAACAT TTGGGTGCAG AATCAATTCT TTCGATCGAG GGAAATACCC GTGCATATCT GAAATGCTTG ATAATCAAGG AGATCTTGGG ACTAAAACGA GCGCAATTTA TGTGTGGCGA TTTTATCGAA TATTTGAGAA ATGCCGATAC TAAATTCGAC GTTGCAATCG CCTCTGGAGT GCTCTATCAT ATGAGGAATC CTGTCGAATT AATCGCTATG TTATCTAAGG TTTCAGATGA GATGTTCATT TGGACACATT ACTATGATCA GGAGATCATA TCTCAAAATT CATTAATTCC TGCAAATAAA TTTGGGAACT GCACGATATC TGAGTATGGT GGGTTCAAGC ATGAATTGCA TAGATACGAA TATGACGCGG CTCTCGATTG GACTGGCTTT TGCGGCGGCA GTGACCTATT CAGCAACTGG ATGACTCGCG AGGACATTTT GGCCTGCGTT GAGCATTTCG GATTCAGCGA CATTCGAATT AATTTTGATC ATCCACAACA CCCCAACGGG CCAGCCTTCG CATTATCAGC AACCCGACGA TGA
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Protein sequence | MVDQSVAQIR NYVLNQYVKS TPRPQNAIDI FKGEWTSKLP TPYEDLEVGS TQLFEDPRIS WAVEQFGGVN NKSILELGPL EGGHTYMLEH LGAESILSIE GNTRAYLKCL IIKEILGLKR AQFMCGDFIE YLRNADTKFD VAIASGVLYH MRNPVELIAM LSKVSDEMFI WTHYYDQEII SQNSLIPANK FGNCTISEYG GFKHELHRYE YDAALDWTGF CGGSDLFSNW MTREDILACV EHFGFSDIRI NFDHPQHPNG PAFALSATRR
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