Gene Memar_0152 details

Gene Information

• Locus tag: Memar_0152
• ID: 4846810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 138628
• End bp: 139110
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640114823
• Product: signal transduction protein
• Protein accession: YP_001046069
• Protein GI: 126178104
• COG category: [K] Transcription
• COG ID: [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTAA GAGACGTTAT GACCCCGGAC CCCGTGACCG TCCGGGTCGC TTCAACGGTG 
AGCGAGGCGG CGGGACTGCT CCGGAAGTAC CACATCGGCG GGCTTCCCGT GATGGACGGC 
GACCGGGTGG CGGGAATCGT CACCGAGACG GATATCCTCT CGCTCCTCGA TACCGGGGAC 
ATCTCCGACG ACCTCTGGCT CCCCTCGCCG CTCGAGGTGA TCGAGGTCCC GGTCAGGGAG 
TTCATCAACT GGGAGCGGAC GAAGCGTGCG CTCACCGATA TCGGCAACAT GGAGGTGCGG 
CGGGTGATGA GCAGCCCGGT CATCGCCATC GGCGAGGATT CGGATATTGC CGATGCGGCT 
TCCCTGATGC TCCGCGAGGG GATTGCACGC CTCCCGGTGC TCCGCGACGA CAACCTGGTC 
GGGATCGTCA CCCGGGCGGA TATCGTCCAC GGCCTCGGGG CGTCTTCGGG GGAGAAATCG 
TGA 

 

Protein sequence

MKVRDVMTPD PVTVRVASTV SEAAGLLRKY HIGGLPVMDG DRVAGIVTET DILSLLDTGD 
ISDDLWLPSP LEVIEVPVRE FINWERTKRA LTDIGNMEVR RVMSSPVIAI GEDSDIADAA 
SLMLREGIAR LPVLRDDNLV GIVTRADIVH GLGASSGEKS