Gene Memar_0142 details

Gene Information

• Locus tag: Memar_0142
• ID: 4848330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 130538
• End bp: 131239
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640114813
• Product: hypothetical protein
• Protein accession: YP_001046059
• Protein GI: 126178094

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.882205
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAAA AACGGCAACT CCTGCCGGTA ATCGTTGTAC TTCTGCTGAC GGCATCGGTC 
TGTCCAGGAC CCGCTTCTGC GAATCCGGTT GCCGATGGAT ATAACATAAC TGTTGAACGT 
GCAGAACTTA CGGATGACGA ATATACCGCG GCCGTTGAAT TCCTCAGGTC AAGCGAACAT 
GTCGTTGATA CGCGAGGCTA TCTACCAGAG TTCAAAGACG CTCAACACCG TCGTTCATGG 
TATAACTTCC TGGAGAATCT CACAAGCGAC ACGTTCGACT CAGTAAAACC CTATCTTTAC 
CCGGATGGCC CTGTTATCGG TTTTGGCTAC GATATTGAAG GGTATGTTGG AATCGGTATT 
GTGGAGGAAT ATCCTCGGGA TAAAGCCAGC GTTGCGGTGG ACGAGATATA CACAATGCTG 
AACGGAGAGG CAGAAAAACT GGGAGTTGAA GATATCCCCG TCAAGGTCAG AACTGTCGAC 
CCTGACAGTC TCGAACTTGA TGTGCTGATC GATCCGACGG ACGGCGAGAC ACCGCCGGCC 
GTGCTTGCGG AACCCGCAGA TATGACGACG TACCGGGGAT CCGGGGGTGC GTACAGCATC 
TTCTACAACC CCGTGCTCCT CGGGTGTGCT CTCGGGGCCG TGATCGTGCT CGCGGTGGGC 
TACTACCTCA TCCGGAGGTC CCGCGGGAAG GACGCGCCGT GA 

 

Protein sequence

MEKKRQLLPV IVVLLLTASV CPGPASANPV ADGYNITVER AELTDDEYTA AVEFLRSSEH 
VVDTRGYLPE FKDAQHRRSW YNFLENLTSD TFDSVKPYLY PDGPVIGFGY DIEGYVGIGI 
VEEYPRDKAS VAVDEIYTML NGEAEKLGVE DIPVKVRTVD PDSLELDVLI DPTDGETPPA 
VLAEPADMTT YRGSGGAYSI FYNPVLLGCA LGAVIVLAVG YYLIRRSRGK DAP