| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0112 |
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| Symbol | |
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| ID | 4845923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 104265 |
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| End bp | 105386 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640114783 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001046029 |
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| Protein GI | 126178064 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGAAG GATGCGTCCT CGACCGCCTC TCCGCCCTCG GGGTCGATAC CGTGGCGTCC
CTCCCCTGCG ACCGGACGCA GGAGTTCTGC GCCCTGATCC CGGAGCGGTT CCATGCCGTG
AACCTCACCC GGGAGGAGGA CGGTGTGGGG ATCTCGGCCG GGCTCGCGAT GGCGGGGGGG
CGACCGGTGC TCCATATGCA GAGTTCGGGG CTGGGGAACT CCTTGAACGC TATCATGTCC
CTCACCGTCA CGTTCGGCCT CCCCCTCCCC GTCCTCGCGA GCTGGCGGGG CGTCTACCGG
GAGGCGATCC CGGCCCAGGT GCCGTTCAAC CGGGCGGTCC CGGACGTGCT CCGTGCGCTC
GGGATCCCGC ATACGATCAT CCGCGACCCT TCGGATGAGG GATTGATCGA TGAGGTCGTC
CAGGACGCCT ACGATTCCAT GCGGCCGCAC GTGGGGCTGA TCCTCCCCTC GTTCTGGGAG
GGAACGGAGG AGGCCTGCCC GGTGGAGCAG CCGCCCCCGC CCCGGGCCCG CGAGTCGGCG
CTCGAGTACC GGCGAACCTT CCGGGAACCG GTGATGGCCC GGAACGACGC AATCCGGGCT
ATCGCCGACA GCCTGGATGG GGAAGCGGGC GTCGCGAACA TCGGGGTCCC CTCAAAGGAG
CTCTACGCGG CCCGCGACCG GGACCTGAAC TTCTACATGC TCGGGAGTTA CACCCAGGCG
ACGCCGATCG GGCTCGGGCT CTCGCTCGCG ACGGATAGAG ACGTCGTCGT CCTCGACGGC
GACGGGAGCC TGCTCGGGAC CGCGGTCCTC CCGGTGGTGG CGGCGGAATC CCCGTCGAAC
CTCACGGTCG TCTGCCTGGA CAACGGGGCC TTCGGCAGCA CCGGAAACCA GCCCACCCCG
GCCTCCGGCC TCGTGGACAT GGAGCTCCTC GCCCGTGCCG CCGGGATCCG GCGGACCTGT
ATGGTGCAGG ACGAAGAAGA GCTCGCCGAC GCATGGGAGA ACCGGGTACG GGGTCCGAAC
TTCATCCACG TTGTGTTGAA GCCCGGGAAT GCGGCGGTCC CGAATATTCC CCTCACTCCG
GCGGGGATCC GGGAGCGGTT CGTGCGGGCG CTTCGAGGGT GA
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| Protein sequence | MREGCVLDRL SALGVDTVAS LPCDRTQEFC ALIPERFHAV NLTREEDGVG ISAGLAMAGG
RPVLHMQSSG LGNSLNAIMS LTVTFGLPLP VLASWRGVYR EAIPAQVPFN RAVPDVLRAL
GIPHTIIRDP SDEGLIDEVV QDAYDSMRPH VGLILPSFWE GTEEACPVEQ PPPPRARESA
LEYRRTFREP VMARNDAIRA IADSLDGEAG VANIGVPSKE LYAARDRDLN FYMLGSYTQA
TPIGLGLSLA TDRDVVVLDG DGSLLGTAVL PVVAAESPSN LTVVCLDNGA FGSTGNQPTP
ASGLVDMELL ARAAGIRRTC MVQDEEELAD AWENRVRGPN FIHVVLKPGN AAVPNIPLTP
AGIRERFVRA LRG
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