| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0111 |
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| Symbol | |
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| ID | 4845938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 102980 |
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| End bp | 104272 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640114782 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_001046028 |
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| Protein GI | 126178063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.726642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGAGA AATACCTCCT CCACTGCCCG GGGTGCGGCC GGCTGTTCCC GGACAACTAC
ACCCTCGACT GCCCCTTGGG GTGCAACGCC CTCCTCCGAA CGGTCTACGC CGAGCACCGG
CTCACTCTCC GGGATCTCCC CGGGATCTTC CGCTACTCTT CGTGGCTTCC CATCGAGGGC
CATCTCCGGA TCGACGCCGG CCCGGTCTCT TACGCGAGTG AGGGGCTCGC CCGGGAACTC
GGTCTCTCAA ACCTCACCGT CACCTTCTCG GGCTACTGGC CCGAGCGGGG CGGGCGGATG
GAGACCTGCT CCTTCAAGGA GCTCGAGGCG CAGCCGACGG TGCTGCGCCT CGGGGAGAAG
GGCGCCGGGG TCCTCCAGAT CTCCTCGGCG GGGAACACCG GCCGGGCCTT CTGCCAGGTC
TCGGCCCTGA CCGGGGCCCC GGTCGTGGTG GTGGTCCCGG CATCCGCCGC CGACCGGCTC
TGGACGACGG TTCCGGCCCC GAACGTCTGC CTCATCACGG TGGAAGGGGA CTACTCCGAC
TCGATCGCGT TCGGGCGGGA GGTCTGCTCG CTCCCCGGTA TCGTCCCCGA GGGCGGGGCG
AAGAACGTCG CCCGGCGGGA CGGGATGGGG ACGGTGATGC TCGATGCGGC ACTTTTTGCC
GGCCGGCTCC CCGACGCCTA CTTCCAGGCG ATCGGGAGCG GAACCGGTGG GATCGCCGCG
TGGGAGGCGG CGGAGCGGCT CGTCGCCGAC GGCCGATTCG GTTCCCGTCT CCCGACCCTC
CACCTCTCCC AGAACCTACC CTTCGTCCCG ATGGTCCGGG CCTGGGAGGC GGGGAGGCGG
GAGATTGTTC CTGAGGTTGA TATGCCCGAC GCCGAAGCCT CGATCGTCCG GGTCTCCGCC
GACGTCCTGA CGAACCGCCA CCCGCCCTGG GAGGTCCGCG GTGGGGTCTA CGATGCGCTC
GCGGCCTCGG GCGGGAGGAT GTATGCGGTC GCTAACGACG ACACCCGGTC TGCCGGCCGG
CTCTTTGAGG CGACGGAGGA GATCGACCTC GACCCGGCTG CCGCGGTCGC GGTCGCCTCG
CTCATCCGGG CGGCGGAGGA GGGATTCATC GGCCCGGATG ACCACATCCT CCTGAACGTC
ACCGGCGGGG GCTACGCACG TGCGGCGGAA GACCTCGACC GCTACCCGGT TGAGCCTTAC
CTCCGGGTCC GGGCCGGTGA GGCCTTCGCA GGGGATGTGC GGGACGCCGT CCGGGGCTGG
CTCGCGGAGC AGGAGGTGGT TGTCCGTGCG TGA
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| Protein sequence | MREKYLLHCP GCGRLFPDNY TLDCPLGCNA LLRTVYAEHR LTLRDLPGIF RYSSWLPIEG
HLRIDAGPVS YASEGLAREL GLSNLTVTFS GYWPERGGRM ETCSFKELEA QPTVLRLGEK
GAGVLQISSA GNTGRAFCQV SALTGAPVVV VVPASAADRL WTTVPAPNVC LITVEGDYSD
SIAFGREVCS LPGIVPEGGA KNVARRDGMG TVMLDAALFA GRLPDAYFQA IGSGTGGIAA
WEAAERLVAD GRFGSRLPTL HLSQNLPFVP MVRAWEAGRR EIVPEVDMPD AEASIVRVSA
DVLTNRHPPW EVRGGVYDAL AASGGRMYAV ANDDTRSAGR LFEATEEIDL DPAAAVAVAS
LIRAAEEGFI GPDDHILLNV TGGGYARAAE DLDRYPVEPY LRVRAGEAFA GDVRDAVRGW
LAEQEVVVRA
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