Gene Memar_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0109 
Symbol 
ID4846224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp101128 
End bp101745 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID640114780 
ProductFe-S cluster domain-containing protein 
Protein accessionYP_001046026 
Protein GI126178061 
COG category[R] General function prediction only 
COG ID[COG2000] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.247624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTGGA ACCCACCGGG GAAGGATTGC GGGGCCTGCG GCGCTCCGAC CTGCGAGGCG 
TTCCTCGCCC GGGTCCGGCG GGGAGAGAAA GCCCTCCCGG ACTGCGTCTT CTACCCCACC 
GGGACCGCAC CTTCCCGGTT CGAGGGCGAG GCCCGACACT CCGGTCGCGA CGTCCTCGGC 
GGCGAGTACG ACTTCATCCT CGATCCCCTG CCCGGGGAGG TCTCGGCCAG GAAGATCGTC 
CTCCCCTTCC GCCCGGACCT CGTGGAGAAG TGGGGGATTG CGGCCGGGGA TATCGTCGTC 
GGGAGGCCGG CCGGCGCGGG CTGCCCGGTC CAGCATGTCC TCTCGGTCAT CCGCGCAAGC 
CCGGTAAGCG GCCTCCTCAC CTGCCTGGTC GTCGGCCCGG AGGTTTCGCG GGGCGGAGAG 
TTTAAGGACG TTGAGGCGTA CCACATCGTC GGTTTCGAGG GGATTGCCCG GACGGTGCGG 
CGCGAACCGG TATTCGGGAT GCGGCAGCGG TTCCTGCCCG GCTACTGCAT GATGAACCTT 
ACGCACACGG GTGTCGTGAA TATGATTCTC GCACGGTCCT CGGGTCTCCA TGTGCGGGTG 
GAGGATATCA GGTTATGA
 
Protein sequence
MAWNPPGKDC GACGAPTCEA FLARVRRGEK ALPDCVFYPT GTAPSRFEGE ARHSGRDVLG 
GEYDFILDPL PGEVSARKIV LPFRPDLVEK WGIAAGDIVV GRPAGAGCPV QHVLSVIRAS 
PVSGLLTCLV VGPEVSRGGE FKDVEAYHIV GFEGIARTVR REPVFGMRQR FLPGYCMMNL 
THTGVVNMIL ARSSGLHVRV EDIRL