Gene Memar_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0106 
Symbol 
ID4846006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp99051 
End bp99536 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID640114777 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001046023 
Protein GI126178058 
COG category[K] Transcription 
COG ID[COG4800] Predicted transcriptional regulator with an HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCGC GAAAGATCTT CGAAGCCGAC TTTGCCGACG CGCTCCAGGA GGAACTAGCC 
CGGCAGGATA TGAGCATCCG CGACCTCGCG GAACGGGCGG GGATCCCGCC CGCAACCCTC 
TACAAACTCA CGTCGGGCAG GGCGGACCCA CGCCTCTCGA CCGTCCGGCG GATCGTCAAC 
GTCCTCGAAC CCCGGGAGAA GAGTTTCATC GCGGTGATCG CGGCCCGGTT CCTGCTCGAC 
GAGATCGACA ACCGCGACCT TCCCATCGGC GGGAAGCAAT ACCACATCCG GGGCTACGCG 
GCCGATTCCC TTGAAGAGTG CATCATCGCC GCCGTCCGGG CGGATAAAGA GGGGGCGCTC 
GGGATCATCT GCGCCCCCAT CCTCGCGCCG ATCGTGGAGA AGATCGCCGA CTGCCCGGTG 
GCGATCATCA AGCCGCAGCA GCAGACGCTG ATCGAGGCGA TCGAGACGAT AGCAAAGAGG 
GTTTAG
 
Protein sequence
MLSRKIFEAD FADALQEELA RQDMSIRDLA ERAGIPPATL YKLTSGRADP RLSTVRRIVN 
VLEPREKSFI AVIAARFLLD EIDNRDLPIG GKQYHIRGYA ADSLEECIIA AVRADKEGAL 
GIICAPILAP IVEKIADCPV AIIKPQQQTL IEAIETIAKR V