Gene Memar_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0095 
Symbol 
ID4847950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp88426 
End bp89589 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID640114766 
Producthypothetical protein 
Protein accessionYP_001046012 
Protein GI126178047 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTTG ACGGCAAAAC TCATGCAGCC CGTAAAAGGG CGATCTCCCT TGCTCTTTTA 
TCCCTCGTCG TCCTCACTGC CGTATCGGGG TGCCTCTCGA TCGACGCTGT CGCCGACCCT
CATGCTCTCT CCGTCACCCG AACCGACGCC GCCGGTACCG AGATCTGGCA CACCGTCTTT
GATGGAGGGG GCGATGAATA CGGCACCGTC ATCGTGCCGG TTTCGGACGG CGGCCTGCTT
GTCGGAGGGT CGGTCAAACA ATCTCCGGGA AGCGATGAGC ACGCCCTGCT GCTCAAGATC
GCGGAGGACG GCCGGATCGA GTGGAACCGG TCGTTCCCGG CACGGTATGG CGTTGAGGCA
GTTGCCTCCC ACCCTGACGG CAGTTTCACC GCCGGGACGG GTGACGGGTC TCTATTCCGG
GTTGCCGGCG ACGGGACACC GGTCTGGAGC AGCCGGGTTT CGGGGTCCGT GCCTGGAATC
TCCGGTCTGC CGGACGGAGG CATCGTGGCT GCAGGGAGCA AGCACGAGAG GGATGTCTGG
GTGGCGGTCG TGAACGATAC CGGGTCGCTG CTCCGGGAAG AGACCTACCC GGATCTCGGA
CGGGGACGGG CTCTCGAGGT CGCTTCGGCG TCGGACGGGG GATGCATCGT TGCAGGGACG
ACGGATAGCC ATCCGCTCTG GGTGATGCGG CTCGATGGAG AGGGCAACGT CATCTGGACC
CGCACCTTCG AGGAAGGCCC TGAGTTTATC GGGGTCATGC TTCACCGTGT ATATTCGGTG
CGAGAGAAGC CGGACGGCAG CGTGGAGCTG CTCTATAAGG TCGGCCGGGC CCTGAAAGGA
GAGGACGCCG GAAGATCGGT CACGGTCGAC CGAACCCTCG CCCGGGACGG CTCTGATGTG
AGCGTAACGG AGTTTTATAT GCCCTGCCCG GTTGTCCGGG CCTCCGGCGG CGGTTACGCC
TGTGCCGCCC TCGAGAGTTC CGAGGGCGCC GGTTACACCA TGGGGAACCA TCTCGGGTCG
CCGATTCACG TGATGAAATG CGACGAGCGG GGTGAGATTG TCCGGGTCAG TGCCGGCACG
GAGGCGGAGG TGGAAATCGT CACGGACATC TTGCAGACCC CGGATGGGGG GTTTGCGGTT
CTTGGCGGGT CTACGAGGAT CTGA
 
Protein sequence
MLVDGKTHAA RKRAISLALL SLVVLTAVSG CLSIDAVADP HALSVTRTDA AGTEIWHTVF 
DGGGDEYGTV IVPVSDGGLL VGGSVKQSPG SDEHALLLKI AEDGRIEWNR SFPARYGVEA
VASHPDGSFT AGTGDGSLFR VAGDGTPVWS SRVSGSVPGI SGLPDGGIVA AGSKHERDVW
VAVVNDTGSL LREETYPDLG RGRALEVASA SDGGCIVAGT TDSHPLWVMR LDGEGNVIWT
RTFEEGPEFI GVMLHRVYSV REKPDGSVEL LYKVGRALKG EDAGRSVTVD RTLARDGSDV
SVTEFYMPCP VVRASGGGYA CAALESSEGA GYTMGNHLGS PIHVMKCDER GEIVRVSAGT
EAEVEIVTDI LQTPDGGFAV LGGSTRI